| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcolC_3487 |
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| Symbol | |
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| ID | 6068398 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli ATCC 8739 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010468 |
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| Strand | - |
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| Start bp | 3805076 |
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| End bp | 3806272 |
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| Gene Length | 1197 bp |
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| Protein Length | 398 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 641602903 |
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| Product | 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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| Protein accession | YP_001726428 |
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| Protein GI | 170021474 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0743] 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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| TIGRFAM ID | [TIGR00243] 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0128092 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.114114 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCAAC TCACCATTCT GGGCTCGACC GGCTCGATTG GTTGCAGCAC GCTGGACGTG
GTGCGCCATA ATCCCGAACA CTTCCGCGTA GTTGCGCTGG TGGCAGGCAA AAATGTCACT
CGCATGGTAG AACAGTGCCT GGAATTCTCT CCCCGCTATG CCGTAATGGA CGATGAAGCG
AGTGCGAAAC TTCTTAAAAC GATGCTACAG CAACAGGGTA GCCGCACCGA AGTCTTAAGT
GGGCAACAAG CCGCTTGCGA TATGGCAGCG CTTGAGGATG TTGATCAGGT GATGGCAGCC
ATTGTTGGCG CTGCTGGGCT GTTACCTACG CTTGCTGCGA TCCGCGCAGG TAAAACCATT
TTGCTGGCCA ATAAAGAATC ACTGGTTACC TGCGGACGTC TGTTTATGGA CGCCGTAAAG
CAGAGCAAAG CGCAATTGTT ACCGGTCGAT AGCGAACATA ACGCCATTTT TCAGAGTTTA
CCGCAACCTA TCCAGCATAA TCTGGGATAC GCTGACCTTG AGCAAAATGG CGTGGTGTCC
ATTTTACTTA CCGGGTCTGG TGGCCCTTTC CGTGAGACGC CATTGCGCGA TTTGGCAACA
ATGACGCCCG ATCAAGCCTG CCGTCATCCG AACTGGTCGA TGGGACGTAA AATTTCTGTC
GATTCGGCTA CCATGATGAA CAAAGGTCTG GAATACATTG AAGCGCGTTG GCTGTTTAAC
GCCAGCGCCA GCCAGATGGA AGTGCTGATT CACCCGCAGT CAGTGATTCA CTCAATGGTG
CGCTATCAGG ACGGCAGTGT TCTGGCGCAG CTGGGGGAAC CGGATATGCG TACGCCAATT
GCCCACACCA TGGCATGGCC GAATCGCGTG AACTCTGGCG TGAAGCCGCT CGATTTTTGC
AAACTAAGTG CGTTGACATT TGCCGCACCG GATTATGATC GTTATCCATG CCTGAAACTG
GCGATGGAGG CGTTCGAAAA AGGCCAGGCA GCGACGACAG CATTGAATGC CGCAAACGAA
ATCACCGTTG CTGCTTTTCT TGCGCAACAA ATCCGCTTTA CGGATATCGC TGCGTTGAAT
TTATCCGTAC TGGAAAAAAT GGATATGCGC GAACCACAAT GTGTGGATGA TGTGTTATCT
GTTGATGCGA ACGCGCGTGA AGTCGCCAGA AAAGAGGTGA TGCGTCTCGC AAGCTGA
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| Protein sequence | MKQLTILGST GSIGCSTLDV VRHNPEHFRV VALVAGKNVT RMVEQCLEFS PRYAVMDDEA
SAKLLKTMLQ QQGSRTEVLS GQQAACDMAA LEDVDQVMAA IVGAAGLLPT LAAIRAGKTI
LLANKESLVT CGRLFMDAVK QSKAQLLPVD SEHNAIFQSL PQPIQHNLGY ADLEQNGVVS
ILLTGSGGPF RETPLRDLAT MTPDQACRHP NWSMGRKISV DSATMMNKGL EYIEARWLFN
ASASQMEVLI HPQSVIHSMV RYQDGSVLAQ LGEPDMRTPI AHTMAWPNRV NSGVKPLDFC
KLSALTFAAP DYDRYPCLKL AMEAFEKGQA ATTALNAANE ITVAAFLAQQ IRFTDIAALN
LSVLEKMDMR EPQCVDDVLS VDANAREVAR KEVMRLAS
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