| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcolC_3484 |
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| Symbol | |
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| ID | 6068364 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli ATCC 8739 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010468 |
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| Strand | - |
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| Start bp | 3801895 |
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| End bp | 3803247 |
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| Gene Length | 1353 bp |
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| Protein Length | 450 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 641602900 |
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| Product | zinc metallopeptidase RseP |
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| Protein accession | YP_001726425 |
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| Protein GI | 170021471 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0750] Predicted membrane-associated Zn-dependent proteases 1 |
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| TIGRFAM ID | [TIGR00054] RIP metalloprotease RseP |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00175231 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0731606 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCTGAGTT TTCTCTGGGA TTTGGCTTCG TTCATCGTTG CACTGGGTGT ACTTATCACC
GTGCATGAAT TTGGTCATTT CTGGGTTGCC CGGCGTTGTG GTGTTCGCGT TGAGCGTTTC
TCAATAGGGT TTGGTAAGGC GCTCTGGCGG CGAACTGATA AGCTCGGCAC CGAATATGTT
ATCGCCCTGA TCCCGCTGGG CGGTTATGTC AAAATGCTGG ATGAGCGCGC AGAACCGGTC
GTTCCGGAAC TCCGCCACCA TGCCTTCAAT AATAAATCTG TTGGCCAACG AGCGGCGATT
ATTGCCGCAG GTCCGGTTGC AAACTTCATT TTTGCTATCT TTGCCTACTG GCTGGTTTTT
ATTATTGGTG TGCCTGGCGT ACGTCCGGTG GTTGGTGAAA TAGCAGCCAA TTCGATAGCT
GCGGAAGCAC AAATTGCACC AGGTACGGAA CTAAAAGCCG TAGATGGTAT CGAAACGCCT
GATTGGGATG CCGTGCGTTT GCAGTTGGTC GATAAAATTG GCGATGAAAG CACCACCATT
ACAGTAGCGC CATTTGGCAG CGACCAACGG CGGGATGTAA AGCTCGATTT ACGTCACTGG
GCGTTTGAGC CTGATAAAGA AGATCCGGTA TCTTCGCTGG GGATTCGTCC TCGTGGGCCG
CAAATTGAAC CTGTACTGGA AAATGTGCAG CCAAACTCGG CGGCAAGCAA GGCAGGTTTG
CAAGCAGGCG ACAGGATCGT TAAAGTCGAT GGTCAGCCCT TAACGCAGTG GGTGACCTTT
GTGATGCTTG TCCGGGATAA CCCGGGTAAA TCCTTAGCGT TAGAAATCGA AAGGCAGGGG
AGTCCCTTGT CTTTGACATT AATCCCGGAG AGTAAACCGG GTAATGGTAA AGCGATTGGT
TTTGTCGATA TTGAGCCGAA AGTCATTCCT TTGCCAGATG AGTATAAAGT TGTACGCCAG
TATGGGCCGT TCAACGCCAT CGTCGAAGCC ACGGACAAAA CGTGGCAGCT GATGAAGCTG
ACGGTCAGTA TGCTGGGAAA ATTGATCACC GGTGATGTGA AACTGAACAA CCTCAGTGGG
CCGATCTCTA TCGCCAAGGG GGCTGGGATG ACAGCGGAAC TCGGGGTAGT TTATTACCTG
CCGTTTCTTG CGCTTATTAG CGTGAACTTA GGGATAATTA ACCTGTTTCC GTTGCCCGTA
CTTGACGGGG GGCATCTGCT GTTCCTTGCG ATCGAAAAGA TCAAGGGCGG ACCGGTATCC
GAGCGGGTTC AAGACTTTTG TTATCGCATT GGCTCGATTC TGCTGGTGCT GTTAATGGGG
CTTGCACTTT TCAATGATTT CTCTCGGTTA TGA
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| Protein sequence | MLSFLWDLAS FIVALGVLIT VHEFGHFWVA RRCGVRVERF SIGFGKALWR RTDKLGTEYV
IALIPLGGYV KMLDERAEPV VPELRHHAFN NKSVGQRAAI IAAGPVANFI FAIFAYWLVF
IIGVPGVRPV VGEIAANSIA AEAQIAPGTE LKAVDGIETP DWDAVRLQLV DKIGDESTTI
TVAPFGSDQR RDVKLDLRHW AFEPDKEDPV SSLGIRPRGP QIEPVLENVQ PNSAASKAGL
QAGDRIVKVD GQPLTQWVTF VMLVRDNPGK SLALEIERQG SPLSLTLIPE SKPGNGKAIG
FVDIEPKVIP LPDEYKVVRQ YGPFNAIVEA TDKTWQLMKL TVSMLGKLIT GDVKLNNLSG
PISIAKGAGM TAELGVVYYL PFLALISVNL GIINLFPLPV LDGGHLLFLA IEKIKGGPVS
ERVQDFCYRI GSILLVLLMG LALFNDFSRL
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