Gene EcolC_3464 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_3464 
Symbol 
ID6068188 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp3780225 
End bp3780932 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content55% 
IMG OID641602880 
Producthypothetical protein 
Protein accessionYP_001726405 
Protein GI170021451 
COG category[S] Function unknown 
COG ID[COG1720] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00104] probable methyltransferase, YaeB/AF_0241 family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0230966 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.865335 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAGTT TCCAGTTCGA GCAAATAGGC GTTATTCGCT CGCCCTATAA AGAAAAGTTC 
GCCGTTCCGC GCCAGCCAGG TCTGGTAAAA AGCGCCAACG GCGAACTGCA TCTCATTGCT
CCCTACAACC AGGCCGACGC CGTTCGCGGC CTGGAAGCGT TCAGCCATTT ATGGATCCTT
TTCGTCTTTC ATCAAACGAT GGTAGGCGGC TGGCGTCCGA CTGTGCGTCC ACCGCGCCTC
GGCGGTAACG CCAGAATGGG GGTTTTCGCA ACACGCTCTA CTTTCCGCCC TAACCCAATT
GGCATGTCGC TGGTAGAGCT GAAAGAGGTT GTTTGCCATA AAGACAGCGT GATTCTGAAG
CTCGGCAGTC TGGATCTGGT CGATGGTACG CCGGTAGTGG ATATCAAACC GTATCTCCCC
TTTGCCGAAT CGCTTCCCGA TGCCAGTGCC AGCTATGCGC AAAGTGCGCC AGCTGCAGAG
ATGGCGGTGA GTTTTACCGC AGAGGTCGAA AAGCAGCTTT TGACGCTGGA GAAGCGTTAT
CCGCAGTTAA CGCTGTTTAT CCGCGAAGTA CTGGCGCAGG ACCCGCGCCC GGCCTATCGT
AAAGGTGAGG AAACGGGCAA AACCTATGCC GTCTGGCTAC ATGATTTTAA CGTTCGCTGG
CGCGTCACCG ACGCAGGTTT TGAAGTCTTT GCGCTGGAAC CGCGTTAA
 
Protein sequence
MSSFQFEQIG VIRSPYKEKF AVPRQPGLVK SANGELHLIA PYNQADAVRG LEAFSHLWIL 
FVFHQTMVGG WRPTVRPPRL GGNARMGVFA TRSTFRPNPI GMSLVELKEV VCHKDSVILK
LGSLDLVDGT PVVDIKPYLP FAESLPDASA SYAQSAPAAE MAVSFTAEVE KQLLTLEKRY
PQLTLFIREV LAQDPRPAYR KGEETGKTYA VWLHDFNVRW RVTDAGFEVF ALEPR