| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcolC_3458 |
|---|
| Symbol | dkgB |
|---|
| ID | 6068048 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli ATCC 8739 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010468 |
|---|
| Strand | - |
|---|
| Start bp | 3769757 |
|---|
| End bp | 3770560 |
|---|
| Gene Length | 804 bp |
|---|
| Protein Length | 267 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 641602868 |
|---|
| Product | 2,5-diketo-D-gluconate reductase B |
|---|
| Protein accession | YP_001726399 |
|---|
| Protein GI | 170021445 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0656] Aldo/keto reductases, related to diketogulonate reductase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.412559 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTATCC CTGCATTTGG TTTAGGTACT TTCCGTCTGA AAGACGACGT TGTTATTTCA
TCTGTGAAAA CGGCGCTTGA ACTTGGTTAT CGCGCAATTG ATACTGCACA AATCTATGAT
AACGAAGCCG CAGTAGGTCA GGCGATTGCA GAAAGTGGCG TGCCACGTCA TGAACTCTAC
ATCACCACTA AAATCTGGAT TGAAAATCTC AGCAAAGACA AATTGATCCC GAGTCTGAAA
GAGAGCCTGC AAAAATTGCG TACTGATTAT GTTGATCTGA CTCTAATCCA CTGGCCGTCA
CCAAACGATG AAGTCTCTGT TGAAGAGTTT ATGCAGGCGC TGCTGGAAGC CAAAAAAGAA
GGGTTGACGC GTGAGATCGG TATTTCCAAC TTCACGATCC CATTGATGGA AAAGGCGATT
GCTGCTGTTG GCGCTGAAAA CATCGCTACT AACCAGATTG AACTCTCTCC TTATCTGCAA
AACCGTAAAG TGGTTGCCTG GGCTAAACAG CACGGCATCC ATATTACTTC CTATATGACG
CTGGCGTATG GTAAGGCCCT GAAAGATGAG GTTATTGCTC GTATCGCAGC TAAACACAAT
GCGACTCCGG CACAAGTGAT TCTGGCGTGG GCTATGGGGG AAGGTTACTC AGTAATTCCT
TCTTCTACTA AACGTAAAAA CCTGGAAAGT AATCTTAAGG CACAAAATTT ACAGCTTGAT
GCCGAAGATA AAAAAGCGAT CGCCGCACTG GATTGCAACG ACCGCCTGGT TAGCCCGGAA
GGTCTGGCTC CTGAATGGGA TTAA
|
|---|
| Protein sequence | MAIPAFGLGT FRLKDDVVIS SVKTALELGY RAIDTAQIYD NEAAVGQAIA ESGVPRHELY
ITTKIWIENL SKDKLIPSLK ESLQKLRTDY VDLTLIHWPS PNDEVSVEEF MQALLEAKKE
GLTREIGISN FTIPLMEKAI AAVGAENIAT NQIELSPYLQ NRKVVAWAKQ HGIHITSYMT
LAYGKALKDE VIARIAAKHN ATPAQVILAW AMGEGYSVIP SSTKRKNLES NLKAQNLQLD
AEDKKAIAAL DCNDRLVSPE GLAPEWD
|
|---|
| |