Gene EcolC_3456 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_3456 
Symbol 
ID6068025 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp3767805 
End bp3768605 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content53% 
IMG OID641602866 
Producthypothetical protein 
Protein accessionYP_001726397 
Protein GI170021443 
COG category[S] Function unknown 
COG ID[COG3021] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.809421 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGAAAAA ACACCTATGC CATGCGCTAT GTTGCCGGAC AACCTGCGGA AAGGATCTTA 
CCGCCGGGGT CTTTTGCGAG CATCGGCCAG GCATTACCAC CTGGGGAACC GTTAAGTACC
GAAGAGCGTA TTCGGATCCT GGTGTGGAAC ATATACAAAC AGCAACGCGC TGAATGGTTG
TCGGTATTAA AGAACTACGG CAAAGATGCA CATCTGGTGT TATTGCAGGA AGCGCAGACA
ACGCCAGAGT TAGTACAGTT TGCGACCGCT AACTATCTTG CCGCCGATCA GGTACCCGCT
TTCGTGCTGC CACAACATCC TTCTGGCGTA ATGACCCTTT CGGCGGCACA TCCAGTGTAT
TGCTGCCCGT TACGTGAACG AGAACCCATT TTGCGTCTGG CGAAGTCGGC ACTGGTGACG
GTCTATCCAT TACCTGACAC CCGCCTGTTG ATGGTGGTTA ATATACACGC CGTCAACTTC
AGTCTGGGCG TGGATGTCTA TAGTAAGCAG TTACTTCCTA TTGGTGATCA GATAGCTCAC
CACAGCGGCC CGGTCATTAT GGCGGGAGAT TTCAATGCCT GGAGCCGTAG AAGGATGAAC
GCGTTATATC GCTTTGCGCG GGAAATGTCG CTGCGCCAGG TGCGTTTTAC CGATGATCAG
CGCCGTCGGG CGTTTGGTCG CCCGCTCGAT TTTGTTTTCT ACCGTGGTCT GAACGTCAGT
GAAGCTTCTG TACTGGTTAC GCGCGCTTCC GATCACAATC CGCTACTCGT TGAATTCAGT
CCCGGCAAGC CTGATAAATA A
 
Protein sequence
MRKNTYAMRY VAGQPAERIL PPGSFASIGQ ALPPGEPLST EERIRILVWN IYKQQRAEWL 
SVLKNYGKDA HLVLLQEAQT TPELVQFATA NYLAADQVPA FVLPQHPSGV MTLSAAHPVY
CCPLREREPI LRLAKSALVT VYPLPDTRLL MVVNIHAVNF SLGVDVYSKQ LLPIGDQIAH
HSGPVIMAGD FNAWSRRRMN ALYRFAREMS LRQVRFTDDQ RRRAFGRPLD FVFYRGLNVS
EASVLVTRAS DHNPLLVEFS PGKPDK