Gene EcolC_3453 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_3453 
Symbol 
ID6067997 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp3764945 
End bp3765700 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content40% 
IMG OID641602863 
Producthydroxyacylglutathione hydrolase 
Protein accessionYP_001726394 
Protein GI170021440 
COG category[R] General function prediction only 
COG ID[COG0491] Zn-dependent hydrolases, including glyoxylases 
TIGRFAM ID[TIGR03413] hydroxyacylglutathione hydrolase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.837088 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCTTA ACAGTATTCC CGCCTTTGAT GACAATTACA TCTGGGTTTT GAATGATGAA 
GCAGGTCGCT GCCTGATTGT CGATCCCGGA GACGCAGAGC CAGTATTAAA CGCCATTGCC
GCCAATAACT GGCAACCGGA GGCCATATTT CTCACCCACC ATCACCACGA TCACGTTGGC
GGCGTAAAAG AACTGGTGGA AAAGTTTCCA CAAATTGTGG TGTATGGTCC ACAAGAGACA
CAAGATAAGG GAACAACACA GGTAGTCAAA GATGGCGAAA CTGCCTTCGT TTTGGGGCAT
GAATTTAGTG TAATTGCTAC GCCGGGTCAC ACTTTAGGAC ATATCTGTTA CTTCAGTAAA
CCTTATCTAT TTTGCGGCGA CACACTGTTT TCTGGTGGGT GTGGTCGGTT GTTTGAAGGG
ACAGCATCAC AAATGTATCA ATCACTTAAA AAGTTAAGTG TGTTACCTGA CGATACATTG
GTATGTTGTG CTCATGAATA TACCTTATCA AATATGAAGT TTGCTTTGAG TATTCTTCCG
CACGATTTGT CCATAAATGA TTATTATCGT AAAGTTAAGG AGTTACGGGC AAAAAATCAA
ATAACACTAC CCGTAATTCT GAAAAATGAG CGGCAAATTA ATGTTTTTTT AAGAACGGAA
GATATTGATT TAATTAATGT AATTAATGAA GAAACATTAT TGCAACAACC TGAAGAGCGT
TTTGCATGGT TAAGGTCAAA GAAAGATAGG TTCTGA
 
Protein sequence
MNLNSIPAFD DNYIWVLNDE AGRCLIVDPG DAEPVLNAIA ANNWQPEAIF LTHHHHDHVG 
GVKELVEKFP QIVVYGPQET QDKGTTQVVK DGETAFVLGH EFSVIATPGH TLGHICYFSK
PYLFCGDTLF SGGCGRLFEG TASQMYQSLK KLSVLPDDTL VCCAHEYTLS NMKFALSILP
HDLSINDYYR KVKELRAKNQ ITLPVILKNE RQINVFLRTE DIDLINVINE ETLLQQPEER
FAWLRSKKDR F