Gene EcolC_3409 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_3409 
Symbol 
ID6067719 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp3725926 
End bp3726744 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content51% 
IMG OID641602821 
Productintegrase catalytic region 
Protein accessionYP_001726353 
Protein GI170021399 
COG category[L] Replication, recombination and repair 
COG ID[COG2801] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGTCAGG TATTTGGTGT ATACAGGAGC GGTTATTACA ACTGGGTACA GCATGAACCC 
TCAGACAGAA AACAAAGTGA TGAGCGGCTA AAACTGGAGA TTAAGGTGGC ACATATCCGC
ACTCGCGAAA CATATGGAAC CCGGCGGCTT CAGACGGAGC TGGCAGAGAA TGGCATCATC
GTTGGTCGTG ACCGACTGGC ACGTCTTCGT AAGGAGCTAA GGCTACGCTG TAAGCAGAAA
CGCAAGTTCA GAGCGACTAC GAACTCGAAC CACAATCTGC CAGTTGCGCC AAATCTGCTG
AACCAGACGT TCGCTCCTAC AGCACCAAAT CAGGTCTGGG TGGCGGACCT GACGTATGTT
GCCACACAGG AGGGATGGTT GTACCTCGCT GGCATCAAAG ATGTTTATAC GTGCGAAATT
GTCGGCTACG TCATGGGAGA GCGCATGACA AAAGAGCTGA CAGGTAAAGC CCTGTTTATG
GCGCTCAGGA GCCAGCGCCC ACCTGCCGGG CTAATCCACC ACTCTGATCG AGGTTCACAG
TACTGCGCAT ACGATTACCG GGTCATACAG GAGCAGTTTG GTCTGAAAAC ATCGATGTCG
CGTAAAGGTA ACTGTTACGA CAACGCTCCG ATGGAAAGCT TCTGGGGAAC GCTGAAAAAT
GAGAGCCTGA GCCACTATCG TTTTAATAAC CGGGATGAAG CCATCTCAGT AATACGGGAA
TACATTGAGA TTTTCTATAA TCGTCAGCGT CGTCACTCTC GTCTGGGGAA TATCTCCCCG
GCAGCCTTCA GGGAAAAATA TCATCAGATG GCTGCTTAA
 
Protein sequence
MCQVFGVYRS GYYNWVQHEP SDRKQSDERL KLEIKVAHIR TRETYGTRRL QTELAENGII 
VGRDRLARLR KELRLRCKQK RKFRATTNSN HNLPVAPNLL NQTFAPTAPN QVWVADLTYV
ATQEGWLYLA GIKDVYTCEI VGYVMGERMT KELTGKALFM ALRSQRPPAG LIHHSDRGSQ
YCAYDYRVIQ EQFGLKTSMS RKGNCYDNAP MESFWGTLKN ESLSHYRFNN RDEAISVIRE
YIEIFYNRQR RHSRLGNISP AAFREKYHQM AA