Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcolC_3409 |
Symbol | |
ID | 6067719 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli ATCC 8739 |
Kingdom | Bacteria |
Replicon accession | NC_010468 |
Strand | + |
Start bp | 3725926 |
End bp | 3726744 |
Gene Length | 819 bp |
Protein Length | 272 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 641602821 |
Product | integrase catalytic region |
Protein accession | YP_001726353 |
Protein GI | 170021399 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2801] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTGTCAGG TATTTGGTGT ATACAGGAGC GGTTATTACA ACTGGGTACA GCATGAACCC TCAGACAGAA AACAAAGTGA TGAGCGGCTA AAACTGGAGA TTAAGGTGGC ACATATCCGC ACTCGCGAAA CATATGGAAC CCGGCGGCTT CAGACGGAGC TGGCAGAGAA TGGCATCATC GTTGGTCGTG ACCGACTGGC ACGTCTTCGT AAGGAGCTAA GGCTACGCTG TAAGCAGAAA CGCAAGTTCA GAGCGACTAC GAACTCGAAC CACAATCTGC CAGTTGCGCC AAATCTGCTG AACCAGACGT TCGCTCCTAC AGCACCAAAT CAGGTCTGGG TGGCGGACCT GACGTATGTT GCCACACAGG AGGGATGGTT GTACCTCGCT GGCATCAAAG ATGTTTATAC GTGCGAAATT GTCGGCTACG TCATGGGAGA GCGCATGACA AAAGAGCTGA CAGGTAAAGC CCTGTTTATG GCGCTCAGGA GCCAGCGCCC ACCTGCCGGG CTAATCCACC ACTCTGATCG AGGTTCACAG TACTGCGCAT ACGATTACCG GGTCATACAG GAGCAGTTTG GTCTGAAAAC ATCGATGTCG CGTAAAGGTA ACTGTTACGA CAACGCTCCG ATGGAAAGCT TCTGGGGAAC GCTGAAAAAT GAGAGCCTGA GCCACTATCG TTTTAATAAC CGGGATGAAG CCATCTCAGT AATACGGGAA TACATTGAGA TTTTCTATAA TCGTCAGCGT CGTCACTCTC GTCTGGGGAA TATCTCCCCG GCAGCCTTCA GGGAAAAATA TCATCAGATG GCTGCTTAA
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Protein sequence | MCQVFGVYRS GYYNWVQHEP SDRKQSDERL KLEIKVAHIR TRETYGTRRL QTELAENGII VGRDRLARLR KELRLRCKQK RKFRATTNSN HNLPVAPNLL NQTFAPTAPN QVWVADLTYV ATQEGWLYLA GIKDVYTCEI VGYVMGERMT KELTGKALFM ALRSQRPPAG LIHHSDRGSQ YCAYDYRVIQ EQFGLKTSMS RKGNCYDNAP MESFWGTLKN ESLSHYRFNN RDEAISVIRE YIEIFYNRQR RHSRLGNISP AAFREKYHQM AA
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