| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcolC_3398 |
|---|
| Symbol | gmhA |
|---|
| ID | 6067666 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli ATCC 8739 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010468 |
|---|
| Strand | - |
|---|
| Start bp | 3715231 |
|---|
| End bp | 3715809 |
|---|
| Gene Length | 579 bp |
|---|
| Protein Length | 192 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 641602812 |
|---|
| Product | phosphoheptose isomerase |
|---|
| Protein accession | YP_001726344 |
|---|
| Protein GI | 170021390 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0279] Phosphoheptose isomerase |
|---|
| TIGRFAM ID | [TIGR00441] phosphoheptose isomerase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTACCAGG ATCTTATTCG TAACGAACTG AACGAAGCGG CGGAAACGCT GGCTAACTTT
TTAAAAGATG ACGCCAATAT TCACGCCATT CAGCGCGCGG CGGTCCTGTT AGCAGACAGC
TTTAAAGCCG GTGGCAAAGT GCTTTCCTGC GGCAACGGCG GTTCCCATTG CGACGCTATG
CACTTTGCCG AAGAGTTGAC CGGTCGCTAC CGTGAAAACC GTCCGGGCTA CCCGGCGATT
GCTATTTCTG ACGTTAGTCA TATTTCCTGC GTCGGTAATG ATTTCGGTTT CAATGATATT
TTCTCCCGCT ACGTTGAAGC GGTAGGTCGC GAAGGCGATG TACTGCTGGG GATCTCCACC
TCCGGTAACT CTGCAAACGT GATCAAAGCG ATCGCAGCGG CGCGTGAGAA GGGGATGAAA
GTGATCACCC TGACCGGTAA AGACGGCGGC AAAATGGCTG GCACGGCGGA TATCGAAATT
CGCGTACCGC ACTTTGGTTA TGCCGACCGC ATTCAGGAGA TTCACATTAA AGTGATCCAT
ATCCTGATCC AGTTGATTGA AAAAGAGATG GTTAAGTAA
|
|---|
| Protein sequence | MYQDLIRNEL NEAAETLANF LKDDANIHAI QRAAVLLADS FKAGGKVLSC GNGGSHCDAM
HFAEELTGRY RENRPGYPAI AISDVSHISC VGNDFGFNDI FSRYVEAVGR EGDVLLGIST
SGNSANVIKA IAAAREKGMK VITLTGKDGG KMAGTADIEI RVPHFGYADR IQEIHIKVIH
ILIQLIEKEM VK
|
|---|
| |