Gene EcolC_3390 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_3390 
SymbolflhB 
ID6067612 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp3707786 
End bp3708925 
Gene Length1140 bp 
Protein Length379 aa 
Translation table11 
GC content56% 
IMG OID641602804 
Productflagellar biosynthesis protein FlhB 
Protein accessionYP_001726336 
Protein GI170021382 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1377] Flagellar biosynthesis pathway, component FlhB 
TIGRFAM ID[TIGR00328] flagellar biosynthetic protein FlhB 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGATA GCAGCAGCGA AGAAAAAACA GAAAAACCCT CGGCGCAAAA GCTGCGTAAA 
GCGCGCGAAG AGGGGCAACT GCCGCGCTCG AAGGATATGG GGCTGGCGGC GAGCCTGTTT
GCGGCGTTTG TGGTGATCTC CAGTAGTTTT CCGTGGTATG CCGATTTTGT GCGCGAGAGT
TTTATCAGCG TACATCAGTA TGCGCAGGAG ATTAATAACC CGCAGGTGAT CGGCCAGTTT
CTGCGCCATC ACCTGTTAAT TCTCGGCAAG TTTATTCTCA CGCTGCTGCC GATGCCTGCC
GCCGCGCTGC TCTCTTCGCT GGTACCCGGC GGCTGGCTAT TCTTACCGAA AAAAATCCTC
CCGGATTTCA GCAAAATCAG CCCGTTAAAA GGCATTGGGC GGCTGTTTTC CAGTGAGCAT
CTGGCGGAAA CAGGGAAGAT GACGGTGAAG TCGGTAGTGG TGCTGGTGAT GCTGTGGATT
AGCCTGCGCA ATAACTTTGC CGCCTTTCTC GGCCTGCAGG CGCTACCGTT CAAACTGGCG
ATGAATGAGG GTTTGTCGCT CTACGCCAGC GTGATGCGCA ACTTTGTCAT CCTGTTTATC
TTCTTTGCGC TTCTCGACGT ACCGCTGGCG AAAGCCCTGT TCACCAAAGG GCTGAAGATG
ACCAAACAGG AGCTGAAAGA AGAGTATAAA AACCAAGAAG GCAAGCCAGA AGTGAAGGCG
CGCGTGCGGC GACTGCAACG GCAACTGGCG ATGGGGCAAA TTCGCAAAGT GGTGCCGAAA
GCCAACGTGG TGATCACCAA CCCGACCCAC TACGCCGTGG CGTTGCAGTA TGACCAGTCG
CGCGCCGCCG CGCCGTTTGT GGTGGCGAAA GGCACCGATG AAATCGCCCT CTATATTCGC
CAGGTCGCCG CTGAGAATCA GGTGGAAGTG GTCGAGTTCC CGCGGCTGGC GCGCTCGGTT
TACTACACCA CCCAGGTGAA TCAGCAAATT CCGTTTCAGC TTTACCGGGC CATCGCCCAC
GTTCTGACCT ACGTCCTGCA AATGAAACAC TGGCGCGAGG GCGCACAGCC GCGCCCGGCC
CTGAACAGAG ATATTTCCAT TCCCAAAGAG GTGCTTAAAC TGGATGGCGA AAACAACTAA
 
Protein sequence
MADSSSEEKT EKPSAQKLRK AREEGQLPRS KDMGLAASLF AAFVVISSSF PWYADFVRES 
FISVHQYAQE INNPQVIGQF LRHHLLILGK FILTLLPMPA AALLSSLVPG GWLFLPKKIL
PDFSKISPLK GIGRLFSSEH LAETGKMTVK SVVVLVMLWI SLRNNFAAFL GLQALPFKLA
MNEGLSLYAS VMRNFVILFI FFALLDVPLA KALFTKGLKM TKQELKEEYK NQEGKPEVKA
RVRRLQRQLA MGQIRKVVPK ANVVITNPTH YAVALQYDQS RAAAPFVVAK GTDEIALYIR
QVAAENQVEV VEFPRLARSV YYTTQVNQQI PFQLYRAIAH VLTYVLQMKH WREGAQPRPA
LNRDISIPKE VLKLDGENN