| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcolC_3352 |
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| Symbol | |
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| ID | 6067414 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli ATCC 8739 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010468 |
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| Strand | - |
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| Start bp | 3675027 |
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| End bp | 3675743 |
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| Gene Length | 717 bp |
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| Protein Length | 238 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641602766 |
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| Product | flagellar biosynthesis sigma factor |
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| Protein accession | YP_001726298 |
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| Protein GI | 170021344 |
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| COG category | [K] Transcription |
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| COG ID | [COG1191] DNA-directed RNA polymerase specialized sigma subunit |
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| TIGRFAM ID | [TIGR02479] RNA polymerase sigma factor, FliA/WhiG family
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.599421 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCTACAGG ATGTATTCGA GTCGGAAGAA TTTGCTGCCG CGCCGGTATT AACCCCGCAG
CAGGAGAGCC ACTACTTGCA GGCCTATTTA CCGTTGGTGC GTAAAGTGGT GCGGCAACTT
GCCCCGCAGT GTAATTGCAT TATTGATCGT CAGGATATGG AACAAACGGC GTTAATGGGG
CTGCTTAATG CCATCCGCCG CTACGGGCTG CCGGACGAAG GTTTTGCGGG CTATGCCGTG
CACCGTATTC GCGGCGCGAT CCTGGATGAG CTGCGCGCTC TCGACTGGCG ACCGCGCCAG
CTGCGACAGA AATATCATCA GATGAAAGAT CTGATTCGCG AAACGCGCAA AAAACTGGGG
CACGAACCGG AGTGGTCAGA ACTGGCCGTG GAAGGGATCT CGCATGAAGA TTATCTCGAA
TATCAGCAAC TGGAAGGGGC GGAAACGCTC GCCAGCCTGG ACGAACTGCT GAACAGCGAA
GGGCCAGGCA TTCCGCTTGC TGGCCGGGAG CTGGAAGATC AGTTTGTCAC TCAGCAAATG
CTGCAACAGG CGCTTTCACA ATTAAGCGAA AAAGAGCAAC TGATCCTCTC CATGTATTAC
CAGCATGAGA TGAATCTCAA AGAGATTGCG CTGGTATTAG GGCTAACCGA GGCCCGAATT
TGTCAACTGA ATAAACAGAT CGCGCAGAAA ATTCGTGATT TTGTCTATCC GAATTAA
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| Protein sequence | MLQDVFESEE FAAAPVLTPQ QESHYLQAYL PLVRKVVRQL APQCNCIIDR QDMEQTALMG
LLNAIRRYGL PDEGFAGYAV HRIRGAILDE LRALDWRPRQ LRQKYHQMKD LIRETRKKLG
HEPEWSELAV EGISHEDYLE YQQLEGAETL ASLDELLNSE GPGIPLAGRE LEDQFVTQQM
LQQALSQLSE KEQLILSMYY QHEMNLKEIA LVLGLTEARI CQLNKQIAQK IRDFVYPN
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