Gene EcolC_3321 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_3321 
Symbol 
ID6067215 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp3639905 
End bp3640756 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content43% 
IMG OID641602736 
ProductAraC family transcriptional regulator 
Protein accessionYP_001726269 
Protein GI170021315 
COG category[K] Transcription 
COG ID[COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCAGGC AGAAGATTCT ACAGCAGCTC CTGGAGTGGA TTGAGTGCAA TCTTGAGCAC 
CCTATTTCAA TCGAAGATAT CGCACAGAAA TCTGGCTACA GCAGACGCAA CATCCAGCTT
CTGTTCCGAA ATTTCATGCA TGTGCCTTTG GGAGAATACA TTCGCAAACG AAGGCTTTGT
CGTGCCGCCA TTCTTGTCCG GCTCACCGCG AAATCTATGC TTGATATTGC ACTCTCTTTG
CATTTTGATT CACAGCAGTC ATTCAGCCGC GAATTTAAAA AGTTATTCGG CTGCTCTCCC
CGTGAATACC GCCACCGTGA TTATTGGGAT CTCGCAAATA TCTTCCCTTC TTTTTTAATA
CGTCAACAGC AAAAGACGGA GTGTAGATTA ATCAACTTTC CTGAGACACC TATTTTTGGC
AACTCATTTA AATATGACAT TGAAGTGTCG AATAAATCAC CGGATGAAGA AGTCAAACTA
CGACGTCATC ATTTAGCCAG ATGTATGAAG AATTTTAAGA CGGATATCTA TTTCGTTTCC
ACGTTTGAAC CGTCAACAAA ATCGGTCGAT TTGCTCACGG TTGAAACTTT TGCTGGTACG
GTATGTGAAT ATGCTGACAT GCCAAAAGAG TGGACAACGA CCCGAGGACT TTATGCCTCT
TTCCGTTATG AAGGAAACTG GGAAAATTAT CCTGACTGGG TGCGTAACAT CTATCTGATA
GAGTTACCTG CCAGGGGGTT AGCCAGAGTG AACGGCAGCG ATATTGAGCG CTTTTATTAC
AATGAAGATT TCGTAGAAAA GGATGGCAAT GATGTTGTTT GCGAAATTTT TATTCCCGTT
CGTCCGGTTT AG
 
Protein sequence
MIRQKILQQL LEWIECNLEH PISIEDIAQK SGYSRRNIQL LFRNFMHVPL GEYIRKRRLC 
RAAILVRLTA KSMLDIALSL HFDSQQSFSR EFKKLFGCSP REYRHRDYWD LANIFPSFLI
RQQQKTECRL INFPETPIFG NSFKYDIEVS NKSPDEEVKL RRHHLARCMK NFKTDIYFVS
TFEPSTKSVD LLTVETFAGT VCEYADMPKE WTTTRGLYAS FRYEGNWENY PDWVRNIYLI
ELPARGLARV NGSDIERFYY NEDFVEKDGN DVVCEIFIPV RPV