| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcolC_3293 |
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| Symbol | prpB |
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| ID | 6067033 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli ATCC 8739 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010468 |
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| Strand | - |
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| Start bp | 3607469 |
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| End bp | 3608359 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 641602708 |
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| Product | 2-methylisocitrate lyase |
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| Protein accession | YP_001726242 |
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| Protein GI | 170021288 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2513] PEP phosphonomutase and related enzymes |
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| TIGRFAM ID | [TIGR02317] methylisocitrate lyase |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTCTAC ACTCTCCAGG TAAAGCGTTT CGCGCTGCAC TGTCTAAAGA AAATCCATTG
CAGATTGTTG GCACCATTAA CGCCAACCAT GCGCTGTTGG CGCAGCGTGC CGGATATCAG
GCAATTTATC TCTCCGGCGG TGGCGTGGCG GCAGGGTCGC TGGGGCTGCC CGATCTCGGT
ATTTCTACTC TTGATGACGT GTTGACAGAT ATTCGCCGTA TCACCGACGT TTGTTCGCTG
CCGCTGCTGG TGGATGCGGA TATCGGTTTT GGTTCTTCGG CCTTTAACGT GGCGCGTACG
GTGAAATCGA TGATTAAAGC CGGTGCGGCA GGATTGCATA TTGAAGATCA GGTTGGTGCG
AAACGCTGCG GTCATCGTCC GAATAAAGCG ATCGTCTCGA AAGAGGAGAT GGTGGATCGG
ATCCGCGCGG CGGTGGATGC GAAAACCGAT CCTGATTTTG TGATCATGGC GCGCACCGAT
GCGCTGGCGG TAGAGGGGTT GGATGCGGCG ATCGAGCGTG CGCAGGCCTA TGTTGAAGCG
GGTGCCGAGA TGTTGTTCCC GGAGGCGATT ACCGAACTCG CCATGTACCG CCAGTTTGCC
GATGCGGTGC AGGTGCCAAT CCTCGCCAAC ATTACCGAAT TTGGTGCCAC GCCGCTGTTT
ACCATCGACG AATTACGCAG CGCCCATGTC GCAATGGCGC TGTACCCGCT TTCAGCGTTC
CGCGCCATGA ACCGCGCCGC TGAGCATGTC TACAACGTCC TGCGTCAGGA AGGGACGCAG
AAAAGCGTCA TCGACACCAT GCAGACCCGC AACGAGCTGT ACGAAAGCAT CAACTACTAC
CAGTACGAAG AGAAGCTCGA CAACCTGTTT GCCCGTAGCC AGGTGAAATA A
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| Protein sequence | MSLHSPGKAF RAALSKENPL QIVGTINANH ALLAQRAGYQ AIYLSGGGVA AGSLGLPDLG
ISTLDDVLTD IRRITDVCSL PLLVDADIGF GSSAFNVART VKSMIKAGAA GLHIEDQVGA
KRCGHRPNKA IVSKEEMVDR IRAAVDAKTD PDFVIMARTD ALAVEGLDAA IERAQAYVEA
GAEMLFPEAI TELAMYRQFA DAVQVPILAN ITEFGATPLF TIDELRSAHV AMALYPLSAF
RAMNRAAEHV YNVLRQEGTQ KSVIDTMQTR NELYESINYY QYEEKLDNLF ARSQVK
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