Gene EcolC_3220 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_3220 
SymbolnrdR 
ID6066718 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp3526196 
End bp3526645 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content51% 
IMG OID641602635 
Producttranscriptional regulator NrdR 
Protein accessionYP_001726169 
Protein GI170021215 
COG category[K] Transcription 
COG ID[COG1327] Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains 
TIGRFAM ID[TIGR00244] transcriptional regulator NrdR 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000108908 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCATTGCC CATTCTGTTT CGCCGTGGAC ACTAAGGTAA TTGACTCTCG TCTCGTGGGC 
GAGGGTTCAT CCGTACGCCG CCGTCGGCAG TGTCTGGTGT GTAATGAACG TTTCACCACC
TTTGAAGTGG CGGAGCTGGT TATGCCGCGT GTTGTAAAAA GCAACGACGT GCGTGAACCG
TTTAATGAAG AGAAATTGCG TAGCGGAATG CTGCGGGCGC TGGAAAAACG TCCGGTGAGT
TCCGATGACG TCGAAATGGC AATCAATCAT ATTAAATCGC AGCTGCGCGC CACCGGTGAG
CGCGAAGTGC CGAGCAAGAT GATTGGCAAT CTGGTGATGG AGCAATTGAA AAAGCTCGAT
AAAGTCGCCT ATATCCGTTT TGCCTCTGTC TACCGCAGTT TCGAAGATAT CAAAGAATTT
GGCGAAGAGA TCGCGCGCCT GGAGGACTAA
 
Protein sequence
MHCPFCFAVD TKVIDSRLVG EGSSVRRRRQ CLVCNERFTT FEVAELVMPR VVKSNDVREP 
FNEEKLRSGM LRALEKRPVS SDDVEMAINH IKSQLRATGE REVPSKMIGN LVMEQLKKLD
KVAYIRFASV YRSFEDIKEF GEEIARLED