Gene EcolC_3217 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_3217 
SymbolnusB 
ID6066701 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp3524091 
End bp3524510 
Gene Length420 bp 
Protein Length139 aa 
Translation table11 
GC content54% 
IMG OID641602632 
Producttranscription antitermination protein NusB 
Protein accessionYP_001726166 
Protein GI170021212 
COG category[K] Transcription 
COG ID[COG0781] Transcription termination factor 
TIGRFAM ID[TIGR01951] transcription antitermination factor NusB 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000105955 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGAAACCTG CTGCTCGTCG CCGCGCTCGT GAGTGTGCCG TCCAGGCGCT CTACTCCTGG 
CAGTTGTCCC AGAACGACAT CGCTGATGTT GAATACCAGT TCCTGGCTGA ACAGGATGTA
AAAGACGTTG ACGTCCTGTA CTTCCGTGAG CTGCTGGCCG GGGTGGCGAC TAATACCGCA
TACCTCGACG GACTGATGAA GCCATACCTG TCCCGCCTGC TGGAAGAACT GGGACAGGTA
GAAAAAGCAG TACTGCGCAT TGCGCTGTAC GAACTGTCTA AACGTAGCGA TGTGCCATAC
AAAGTGGCCA TTAACGAAGC GATCGAACTG GCGAAATCGT TCGGCGCAGA AGACAGCCAT
AAGTTCGTCA ACGGCGTACT CGATAAAGCA GCACCTGTGA TTCGCCCTAA CAAAAAGTGA
 
Protein sequence
MKPAARRRAR ECAVQALYSW QLSQNDIADV EYQFLAEQDV KDVDVLYFRE LLAGVATNTA 
YLDGLMKPYL SRLLEELGQV EKAVLRIALY ELSKRSDVPY KVAINEAIEL AKSFGAEDSH
KFVNGVLDKA APVIRPNKK