Gene EcolC_3209 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_3209 
Symbol 
ID6066659 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp3516006 
End bp3516596 
Gene Length591 bp 
Protein Length196 aa 
Translation table11 
GC content57% 
IMG OID641602624 
ProductDJ-1 family protein 
Protein accessionYP_001726158 
Protein GI170021204 
COG category[R] General function prediction only 
COG ID[COG0693] Putative intracellular protease/amidase 
TIGRFAM ID[TIGR01383] DJ-1 family protein 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000549408 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGCGCAT CGGCACTGGT TTGCCTCGCC CCTGGTAGTG AAGAGACTGA AGCCGTCACC 
ACTATCGATC TGCTGGTTCG CGGCGGTATC AAAGTCACCA CTGCCAGCGT CGCCAGCGAT
GGTAACCTGG CGATTACCTG CTCGCGCGGC GTGAAGCTGC TGGCGGATGC GCCGCTGGTC
GAAGTGGCTG ATGGCGAATA TGACGTGATC GTGCTGCCTG GTGGCATTAA AGGCGCGGAG
TGTTTTCGCG ATAGCACTCT GCTGGTTGAA ACCGTTAAAC AGTTCCACCG TTCCGGGCGT
ATCGTCGCGG CTATTTGCGC CGCGCCAGCC ACCGTGCTGG TGCCGCACGA TATCTTCCCG
ATTGGTAATA TGACCGGCTT CCCGACGCTG AAAGACAAAA TTCCCGCCGA ACAATGGCTG
GACAAGCGCG TCGTCTGGGA TGCACGGGTA AAATTGCTGA CCAGCCAGGG GCCGGGTACA
GCTATCGACT TTGGTCTGAA AATTATCGAC CTGTTGGTTG GGCGTGAAAA AGCCCATGAA
GTGGCATCAC AACTGGTGAT GGCGGCAGGG ATTTATAATT ATTACGAGTA G
 
Protein sequence
MSASALVCLA PGSEETEAVT TIDLLVRGGI KVTTASVASD GNLAITCSRG VKLLADAPLV 
EVADGEYDVI VLPGGIKGAE CFRDSTLLVE TVKQFHRSGR IVAAICAAPA TVLVPHDIFP
IGNMTGFPTL KDKIPAEQWL DKRVVWDARV KLLTSQGPGT AIDFGLKIID LLVGREKAHE
VASQLVMAAG IYNYYE