Gene EcolC_3190 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_3190 
Symbol 
ID6066609 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp3495337 
End bp3495708 
Gene Length372 bp 
Protein Length123 aa 
Translation table11 
GC content54% 
IMG OID641602605 
Producthelix-hairpin-helix repeat-containing competence protein ComEA 
Protein accessionYP_001726139 
Protein GI170021185 
COG category[L] Replication, recombination and repair 
COG ID[COG1555] DNA uptake protein and related DNA-binding proteins 
TIGRFAM ID[TIGR00426] competence protein ComEA helix-hairpin-helix repeat region 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.550856 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0175566 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACACG GAATTAAAGC ACTGCTCATT ACCCTGTCTC TGGCTTGTGC CGGAATGTCT 
CATAGCGCGC TGGCGGCAGC TCCTGCGGCG AAACCGACAA CGGTAGAAAC CAAAGCGGAA
GCTCCTGCAG CACAAAGTAA AGCAGCAGTA CTGGCGAAAG CCAGTGACGA AGAAGGCACC
CGGGTCAGCA TTAATAATGC CAGCGCGGAA GAGTTAGCCC GCGCGATGAA TGGCGTTGGC
CTGAAGAAAG CGCAGGCGAT TGTCAGTTAT CGCGAAGAGT ACGGTCCGTT TAAAACGGTG
GAGGATCTAA AGCAGGTGCC GGGGATGGGC AATTCGCTGG TGGAACGTAA TCTGGCGGTA
TTAACCCTGT AA
 
Protein sequence
MKHGIKALLI TLSLACAGMS HSALAAAPAA KPTTVETKAE APAAQSKAAV LAKASDEEGT 
RVSINNASAE ELARAMNGVG LKKAQAIVSY REEYGPFKTV EDLKQVPGMG NSLVERNLAV
LTL