| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcolC_3188 |
|---|
| Symbol | |
|---|
| ID | 6066605 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli ATCC 8739 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010468 |
|---|
| Strand | + |
|---|
| Start bp | 3494086 |
|---|
| End bp | 3494781 |
|---|
| Gene Length | 696 bp |
|---|
| Protein Length | 231 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 641602603 |
|---|
| Product | queuosine biosynthesis protein QueC |
|---|
| Protein accession | YP_001726137 |
|---|
| Protein GI | 170021183 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0603] Predicted PP-loop superfamily ATPase |
|---|
| TIGRFAM ID | [TIGR00364] exsB protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.0204492 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACGTG CTGTCGTTGT GTTCAGTGGA GGCCAGGATT CCACCACCTG TCTGGTGCAG
GCATTACAAC AATATGATGA AGTCCATTGC GTGACGTTCG ATTACGGTCA GCGACATCGC
GCAGAAATCG ACGTGGCACG CGAACTGGCG CTGAAACTGG GAGCACGCGC GCATAAGGTT
CTTGATGTAA CGCTGCTCAA CGAGCTGGCG GTCAGCAGCC TGACACGTGA CAGCATTCCG
GTGCCTGATT ATGAACCTGA AGCCGATGGC ATCCCGAATA CGTTTGTCCC AGGGCGTAAT
ATTTTGTTCC TGACGCTGGC GGCAATATAT GCGTATCAGG TAAAAGCAGA AGCCGTAATT
ACCGGCGTCT GTGAAACGGA TTTCTCCGGC TACCCGGATT GCCGCGATGA GTTTGTGAAA
GCACTAAACC ATGCCGTCAG TTTGGGCATG GCGAAAGATA TTCGTTTTGA AACGCCGCTG
ATGTGGATTG ATAAAGCGGA AACCTGGGCG CTGGCAGATT ATTACGGCAA ACTGGATTTA
GTCCGTAACG AAACGTTGAC CTGCTATAAC GGCATTAAAG GCGACGGTTG CAGTCATTGT
GCGGCATGTA ATTTACGCGC CAACGGTTTG AATCATTATC TGGCCGATAA ACCGACGGTG
ATGGCAGCGA TGAAGCAGAA AACCGGGTTG AGGTAA
|
|---|
| Protein sequence | MKRAVVVFSG GQDSTTCLVQ ALQQYDEVHC VTFDYGQRHR AEIDVARELA LKLGARAHKV
LDVTLLNELA VSSLTRDSIP VPDYEPEADG IPNTFVPGRN ILFLTLAAIY AYQVKAEAVI
TGVCETDFSG YPDCRDEFVK ALNHAVSLGM AKDIRFETPL MWIDKAETWA LADYYGKLDL
VRNETLTCYN GIKGDGCSHC AACNLRANGL NHYLADKPTV MAAMKQKTGL R
|
|---|
| |