| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcolC_3175 |
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| Symbol | |
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| ID | 6066572 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli ATCC 8739 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010468 |
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| Strand | + |
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| Start bp | 3479143 |
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| End bp | 3481275 |
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| Gene Length | 2133 bp |
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| Protein Length | 710 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641602591 |
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| Product | lipopolysaccharide biosynthesis protein |
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| Protein accession | YP_001726125 |
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| Protein GI | 170021171 |
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| COG category | [D] Cell cycle control, cell division, chromosome partitioning
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0489] ATPases involved in chromosome partitioning
[COG3206] Uncharacterized protein involved in exopolysaccharide biosynthesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.659876 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATTAT CAATAGTGGA AAATGGAAAA AAACGGGAAG AGACCGTCGA CGTTTCCAGA
TTTGCCAAAG AAATTAAAAA GAACGCCTGT AAGATTGTAC TTGCGGGAAT TATCAGCGGT
GCAGTTGCCT ACCCATTAAT CAGCATGCTG TCATCAAAAT ATGTCTCAAC AGCTACGGTG
TTGCTAAAGG CTCAGGCTGA TAACGTTTCG CCGTTCCCAC AGGTGGAAGA TTTTGATTCC
ACGCGCACCG GCTACTATGA GACGCAATAT GCCTTGATGC AGTCGCGTAT TGTTCTGGAG
AAAGCGGTTC GCGAGTTAAA GCTGGATCAA AACCCAGACT TTATTGGCAA AAAAGCGGAT
GAAAAGGCCA GCAACAGCGA AGATGCTGAA CAGCAGCGCA TTGAGCGCGC GCTGAACACG
CTGCAAAAAA ATCTTACCGT TAGCGGTATT CGAACCACTA ATCTGGCGAC AGTCTCTTAT
GAGTCGACAT CGCCACAACT CTCCTCTGAG ATTGCCAACG GCGTCGCACA GGCGTTTATC
GATTATACGT TGGACCAAAA GCGGCTGAAG ACAGAAAAAG CCAGAGAAGT AAACCTTCAG
AAAATGGAGG AAGTGCAGAA AGAGATCGCG CAGCAGAAAG CCGATATCGA TAACTTCCTG
GCGAAAGAGG GCTTATTAAC GTTCCGCGGC ATTGATGGCT TCGAAACCGA GCAACTCAGC
ATTGTTACCA ACCGTCTGGC CGATGCTACC CAACGGCGTA TTGCGGCAGA ATCTCTGGAA
AAAGCCGTCA GCGCTGGGGG CCGGGTCTCT CTGGATAACA TCATTTCATT ACCGACGATC
TCTAACCATG CGCAAATTCA GGATTTGCGT ATCGCCATGA TTCAGGCGCA GCGGTCTTTG
TATGAGTTAC AAAAATCATA TGGCCCGAAA CATGCGAAGA TCCTGGAAGC GCAGGCTCAG
GTGAAGGCTA TTCAGGATCA GATGGGCGTG GTGCTCAGTG AGCTTAAAAA AGGCATTCAT
CAGCAATATC TGGCCGCGCT GGCGGATGAA AAGGATTATC AGGCGCAACT TGATCAACAG
AAAGAAATTT TTCAGAAACT GGCTGAAAAA CGCAGCCTGT ATAACAGCCA GAAATTGTCA
CTGGATAAAC TGGAAGATCT TTATAAAACC CTGTATCAGC GGACCCAGGA ACTGTCTCTG
TCCGGCATTA ATGCGGATGC AGTGCTGTAC GATCCGGCTG TCCCGGCAGT GAAGCCATCT
AAGCCAAATA AAGCGTTACT GTTAGTGATG GTGGTGGCGC TGGCCATGGC CTTCTTCTTT
ATGTACGTCA TTGTAAAAGC GGCGATGGAT AATTCCATCA GGACGCTCGG ACAAGTGACA
AAACGACTGG GCGTCGTCTC ACTGGGTGAG ATCCGCCGCA TTGCGGGGGC CGGGGACCGT
GCACAGGTTC GCGATTTGAT CACGCGAAAC CCCTTGAACG CCGACATTAT CCACAGCATT
CGTACACAGA TTTTGTTGGA TAACCGCCCG CAGCAGGTTC TGGCAATCTC CTCTGCAAAG
CAGGGTGAGG GGCGCTCTTT ACTGGCCAGT CTGCTGGCAA ACTCCTTCAG CTTTGATCAG
AAAACCTTAC TGCTTGATTT GGATTTCTTT AACCGTGATG GCCTGTCCGC CGAGTTTTCA
ACATCGACCT CTGCGGGAGT TGCAGAGCTG TTGCGTGGAG AAGTGACACT TGACGCTGCG
CGGATCACGC TTAGTGACAC GCTGGACTTT TTACCCCGCG GAAAAGCGAA CGCTTCGTCT
TTGCTGATGC TGTCTTCGGA ACGTTTTGAA CCTCTCATTC GTGACCTGCG AAATCGCTAC
CAGCGGATCA TCGTCGATGT CTCTGCGGTG AGCCAGAGTC AGGACATCGA GCTGATTAGT
CGGGTGGTTG ATGGTGTGGT TTTCGTTGTG CAAGCGGGGG CTGCGTCCGT GGAGACGCTG
CGCGCGGCGC TGGCGAAAGT TGACGCCAAC CAGGAAGTGG TCATGGGAGC GGTACTCAAT
CTGGTTGAGG AAAAAAATCT GCAGACGAAA GAGAGTCTTC GCTCGCTCAA TATCACTACT
GACGAATTGA TGAATACCAC AGGTCGGTTA TGA
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| Protein sequence | MKLSIVENGK KREETVDVSR FAKEIKKNAC KIVLAGIISG AVAYPLISML SSKYVSTATV
LLKAQADNVS PFPQVEDFDS TRTGYYETQY ALMQSRIVLE KAVRELKLDQ NPDFIGKKAD
EKASNSEDAE QQRIERALNT LQKNLTVSGI RTTNLATVSY ESTSPQLSSE IANGVAQAFI
DYTLDQKRLK TEKAREVNLQ KMEEVQKEIA QQKADIDNFL AKEGLLTFRG IDGFETEQLS
IVTNRLADAT QRRIAAESLE KAVSAGGRVS LDNIISLPTI SNHAQIQDLR IAMIQAQRSL
YELQKSYGPK HAKILEAQAQ VKAIQDQMGV VLSELKKGIH QQYLAALADE KDYQAQLDQQ
KEIFQKLAEK RSLYNSQKLS LDKLEDLYKT LYQRTQELSL SGINADAVLY DPAVPAVKPS
KPNKALLLVM VVALAMAFFF MYVIVKAAMD NSIRTLGQVT KRLGVVSLGE IRRIAGAGDR
AQVRDLITRN PLNADIIHSI RTQILLDNRP QQVLAISSAK QGEGRSLLAS LLANSFSFDQ
KTLLLDLDFF NRDGLSAEFS TSTSAGVAEL LRGEVTLDAA RITLSDTLDF LPRGKANASS
LLMLSSERFE PLIRDLRNRY QRIIVDVSAV SQSQDIELIS RVVDGVVFVV QAGAASVETL
RAALAKVDAN QEVVMGAVLN LVEEKNLQTK ESLRSLNITT DELMNTTGRL
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