Gene EcolC_3174 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_3174 
Symbol 
ID6066571 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp3478583 
End bp3479140 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content46% 
IMG OID641602590 
Productpolysaccharide export protein 
Protein accessionYP_001726124 
Protein GI170021170 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1596] Periplasmic protein involved in polysaccharide export 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGTAA TCAATTTGTG CACATTTTTA CTGTGCAGTA TTTTGTTGGT GGGTTGCTCA 
TCCACCCGAC CGCCTTTAAC AGACGACGCG TCGACTGTCA CGGAGAGTTA TATTCTGGGT
GCCGGCGATA CGGTCAATAT CATGGTTTAC GGTGAACCCG AGATGACCAT GAAATTTATC
ATCGATAAAA GCGGCGCTAT TACTTTCCCT TATATCGGTA AACTGATGCT GAAAGGGAAA
ACGGCAGAGC AGGTGGGGAA AGAAATTACC AAGAAGCTAC GTGGGCATTA TTTGCAAAAC
CCAATGGTTA CCGTCAGCAT CGCAGAATTT CGTAAATTCT ATGTCTCTGG AGAAGTTAGA
AATCCCAATG GTTATGCCTA TGAACCCGGC ATGACTGTTG AGAAGTCTAT TGCCCTGGCG
GGTGGGTTTA CCGATCGCGC GGATCGCAAA GATATCAATA TCCGACTCTC AGGGAATAAT
GAACTGCTTG AGAATGTGGC ATTGACCCAT TCTGTCCGTC CTGGGGACGT AGTGATCATT
GGAATGGGAT TTTTCTAA
 
Protein sequence
MKVINLCTFL LCSILLVGCS STRPPLTDDA STVTESYILG AGDTVNIMVY GEPEMTMKFI 
IDKSGAITFP YIGKLMLKGK TAEQVGKEIT KKLRGHYLQN PMVTVSIAEF RKFYVSGEVR
NPNGYAYEPG MTVEKSIALA GGFTDRADRK DINIRLSGNN ELLENVALTH SVRPGDVVII
GMGFF