Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcolC_3174 |
Symbol | |
ID | 6066571 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli ATCC 8739 |
Kingdom | Bacteria |
Replicon accession | NC_010468 |
Strand | + |
Start bp | 3478583 |
End bp | 3479140 |
Gene Length | 558 bp |
Protein Length | 185 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641602590 |
Product | polysaccharide export protein |
Protein accession | YP_001726124 |
Protein GI | 170021170 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1596] Periplasmic protein involved in polysaccharide export |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGTAA TCAATTTGTG CACATTTTTA CTGTGCAGTA TTTTGTTGGT GGGTTGCTCA TCCACCCGAC CGCCTTTAAC AGACGACGCG TCGACTGTCA CGGAGAGTTA TATTCTGGGT GCCGGCGATA CGGTCAATAT CATGGTTTAC GGTGAACCCG AGATGACCAT GAAATTTATC ATCGATAAAA GCGGCGCTAT TACTTTCCCT TATATCGGTA AACTGATGCT GAAAGGGAAA ACGGCAGAGC AGGTGGGGAA AGAAATTACC AAGAAGCTAC GTGGGCATTA TTTGCAAAAC CCAATGGTTA CCGTCAGCAT CGCAGAATTT CGTAAATTCT ATGTCTCTGG AGAAGTTAGA AATCCCAATG GTTATGCCTA TGAACCCGGC ATGACTGTTG AGAAGTCTAT TGCCCTGGCG GGTGGGTTTA CCGATCGCGC GGATCGCAAA GATATCAATA TCCGACTCTC AGGGAATAAT GAACTGCTTG AGAATGTGGC ATTGACCCAT TCTGTCCGTC CTGGGGACGT AGTGATCATT GGAATGGGAT TTTTCTAA
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Protein sequence | MKVINLCTFL LCSILLVGCS STRPPLTDDA STVTESYILG AGDTVNIMVY GEPEMTMKFI IDKSGAITFP YIGKLMLKGK TAEQVGKEIT KKLRGHYLQN PMVTVSIAEF RKFYVSGEVR NPNGYAYEPG MTVEKSIALA GGFTDRADRK DINIRLSGNN ELLENVALTH SVRPGDVVII GMGFF
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