Gene EcolC_3173 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_3173 
Symbol 
ID6066568 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp3477295 
End bp3478581 
Gene Length1287 bp 
Protein Length428 aa 
Translation table11 
GC content43% 
IMG OID641602589 
Productputative capsular polysaccharide biosynthesis protein 
Protein accessionYP_001726123 
Protein GI170021169 
COG category[S] Function unknown 
COG ID[COG5338] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTATTA AACTTTTGGC CATTACCGGA ATTGTCATTC TACAACCGGT ATGGGCCGAA 
CCCATCCCGA AATCACATAC AGGCATTGCG GGGGTAGATT TTCAAAGCGA CGTTGCAGCG
AATTATGGTT ATTCAGATAA CATCACCTTT CAACCACACA GCAGCAAGGA GAAAGATTCT
GTATTTCAGA GCATTACGCC GACGTTAAGT ATGGTAGGCG AGCGTTTTCA GGATAAATAT
TTGCTGATGT ATTCCGGTGA CTACCGTCGT TACGATAAGG ACTCTGCCGA CAACTACAAC
GATCATTTTT TCCGTTTTAA CGGCGCATGG CGATACGGGC TGAAACACGG ACTGACCCTG
AATCTGGAAG ATTCTCTGGG GCATGAGGAG CGCGGGCGCG GAATTACAGA AGGTTTTGTC
CAGGAACAAT TTAGACAGTT CGGTATTACG TCTCCTTTGA GCCCCCATTT TGTGAATAGC
GAATTGCGTT ACAGTTATGG TGCACCTGAA GGACGCGGCA AGGCTGAGTT GGCATTACAG
TATAAAAAGT TACGTTTCGG TAAGACGGGC GGGGTCCGTA ATGCTGATGT AGACTTTTAC
AATTATCTCC TTGAGCAGGA GTGGTACGAA AATAGTCTTA TTGCTGAAGT TTACGACCAA
TATACCGCGA ACACACGTTT TCGTTATAGT TTTATTACTA ACCAGCGTCG ATACGATCGT
TTATCTGAAA AAGATAGCAA CGAGTACTAT TTGCGCTATG GAGTAAAGTC CCAATTATCG
GACAAAACAA ACATCGACAT GAATGTCGCG TGGTTGTATA AGACGTTTGA GAATAATGCC
AACGCTCGAA ATTTTAATGG ATTGAATTGG GACATACAGG GAGAGTGGAA GCCGCTAAAA
CAGTCTGTTG TTACGCTACA TACTTCACAG AATATTAAAG ATCCGTCCGA GGTGGGTGGA
TATATTTTAT TCACCAAATA TGGTGTTTCG TACCAACACT TTTGGTTGGG GGATCGTTTT
TCTACTACCC TGGATTATTC TCTTAGCCGG GAGGATTACA AAAAACAGGA CAAAAATCGT
CGTGACAGGA ATGGCGTGTT TACGATGAAA ATGAGTTACG ACTATACCCC TTCGGTTAAC
GTTGAACTCA AGTATCTTCT GAATAAGTTG GATTCGAATA AGAATACGGA TTCGTTCTAC
ATTGGACCTA ACGACGAGCG GGAAGTAACA AGGACGTTAG GTTATGACAA TTCAATGATT
ATGCTTACTG CTAAGGTTCA GATATAA
 
Protein sequence
MRIKLLAITG IVILQPVWAE PIPKSHTGIA GVDFQSDVAA NYGYSDNITF QPHSSKEKDS 
VFQSITPTLS MVGERFQDKY LLMYSGDYRR YDKDSADNYN DHFFRFNGAW RYGLKHGLTL
NLEDSLGHEE RGRGITEGFV QEQFRQFGIT SPLSPHFVNS ELRYSYGAPE GRGKAELALQ
YKKLRFGKTG GVRNADVDFY NYLLEQEWYE NSLIAEVYDQ YTANTRFRYS FITNQRRYDR
LSEKDSNEYY LRYGVKSQLS DKTNIDMNVA WLYKTFENNA NARNFNGLNW DIQGEWKPLK
QSVVTLHTSQ NIKDPSEVGG YILFTKYGVS YQHFWLGDRF STTLDYSLSR EDYKKQDKNR
RDRNGVFTMK MSYDYTPSVN VELKYLLNKL DSNKNTDSFY IGPNDEREVT RTLGYDNSMI
MLTAKVQI