Gene EcolC_3167 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_3167 
Symbol 
ID6066542 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp3470917 
End bp3472689 
Gene Length1773 bp 
Protein Length590 aa 
Translation table11 
GC content54% 
IMG OID641602583 
Productputative multidrug transporter membraneATP-binding components 
Protein accessionYP_001726117 
Protein GI170021163 
COG category[V] Defense mechanisms 
COG ID[COG1132] ABC-type multidrug transport system, ATPase and permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.564857 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGATTAT TTGCTCAATT AAGCTGGTAT TTCCGTCGGG AATGGCGTCG CTATCTCGGG 
GCTGTCGCCT TGCTTGTCAT TATCGCGATG CTGCAACTGG TTCCGCCAAA AGTGGTTGGT
ATTGTTGTCG ATGGCGTGAC AGAACAACAC TTTACTACCG GGCAGATCCT GATGTGGATC
GCCACCATGG TGCTGATTGC CGTTGTGGTT TATCTCCTGC GTTACGTCTG GCGCGTATTG
CTGTTTGGTG CGTCTTATCA ACTGGCTGTA GAACTGCGTG AAGATTATTA CCGTCAGCTA
AGCCGGCAGC ATCCTGAGTT TTACCTGCGT CATCGCACGG GTGACCTCAT GGCTCGTGCG
ACCAATGATG TCGATCGCGT CGTGTTTGCC GCCGGAGAAG GGGTGCTGAC GCTGGTGGAT
TCACTGGTAA TGGGCTGCGC TGTGTTGATT ATGATGTCTA CGCAAATTAG CTGGCAGTTG
ACCTTATTTG CCCTGTTGCC GATGCCAGTG ATGGCGATCA TGATCAAGCG CAACGGCGAT
GCCTTGCATG AACGCTTTAA GCTGGCACAG GCGGCGTTTT CTAGTCTTAA TGACCGCACC
CAGGAAAGCC TCACCAGTAT CCGCATGATC AAAGCCTTTG GTCTGGAAGA TCGCCAGTCG
GCGTTATTTG CCGCGGATGC CGAAGATACC GGCAAAAAAA ACATGCGGGT GGCGCGTATT
GATGCTCGTT TCGACCCGAC CATCTATATC GCGATTGGTA TGGCGAACTT GCTGGCGATT
GGCGGCGGTA GTTGGATGGT GGTGCAGGGC AGTTTAACGC TGGGCCAGCT CACCAGTTTT
ATGATGTATT TAGGTCTGAT GATTTGGCCA ATGCTGGCGC TGGCATGGAT GTTTAACATT
GTGGAACGTG GTAGTGCTGC GTACAGCCGT ATTCGCGCGA TGCTGGCGGA AGCGCCGGTG
GTGAACGATG GTAGCGAACC CGTGCCGGAA GGGCGTGGCG AACTGGATGT AAATATTCAC
CAGTTCACGT ATCCGCAGAC TGACCATCCT GCGCTGGAAA ACGTTAATTT CGCCCTGAAA
CCCGGTCAGA TGCTGGGTAT CTGCGGGCCG ACTGGTTCCG GCAAAAGTAC CCTGTTGTCG
CTCATTCAGC GTCATTTCGA CGTCAGCGAG GGGGATATTC GCTTTCATGA TATTCCTCTG
ACGAAGTTAC AACTCGATAG CTGGCGTAGC CGCCTGGCGG TAGTTAGCCA GACGCCATTC
CTTTTTTCTG ACACTGTGGC GAATAACATC GCGCTGGGTT GCCCGAATGC CACCCAGCAA
GAGATTGAGC ATGTCGCGCG GTTAGCCAGC GTACATGACG ATATTTTGCG TCTACCGCAA
GGTTACGATA CAGAGGTGGG CGAGCGCGGT GTGATGCTTT CCGGCGGGCA AAAACAGCGT
ATCTCCATTG CTCGTGCGTT ATTAGTCAAC GCGGAAATCC TCATCCTTGA TGATGCGCTT
TCGGCGGTGG ACGGACGCAC TGAGCACCAG ATCCTGCATA ACCTGCGTCA GTGGGGGCAG
GGAAGAACGG TAATCATCAG TGCCCATCGC CTTTCTGCAC TGACGGAAGC CAGTGAAATT
ATTGTGATGC AGCACGGACA TATCGCCCAG CGTGGCAATC ATGATGTGCT GGCACAACAA
AGCGGCTGGT ATCGCGATAT GTATCGCTAT CAACAACTGG AGGCGGCGCT CGACGACGCT
CCGGAAAATC GCGAGGAGGC CGTCGATGCG TAG
 
Protein sequence
MRLFAQLSWY FRREWRRYLG AVALLVIIAM LQLVPPKVVG IVVDGVTEQH FTTGQILMWI 
ATMVLIAVVV YLLRYVWRVL LFGASYQLAV ELREDYYRQL SRQHPEFYLR HRTGDLMARA
TNDVDRVVFA AGEGVLTLVD SLVMGCAVLI MMSTQISWQL TLFALLPMPV MAIMIKRNGD
ALHERFKLAQ AAFSSLNDRT QESLTSIRMI KAFGLEDRQS ALFAADAEDT GKKNMRVARI
DARFDPTIYI AIGMANLLAI GGGSWMVVQG SLTLGQLTSF MMYLGLMIWP MLALAWMFNI
VERGSAAYSR IRAMLAEAPV VNDGSEPVPE GRGELDVNIH QFTYPQTDHP ALENVNFALK
PGQMLGICGP TGSGKSTLLS LIQRHFDVSE GDIRFHDIPL TKLQLDSWRS RLAVVSQTPF
LFSDTVANNI ALGCPNATQQ EIEHVARLAS VHDDILRLPQ GYDTEVGERG VMLSGGQKQR
ISIARALLVN AEILILDDAL SAVDGRTEHQ ILHNLRQWGQ GRTVIISAHR LSALTEASEI
IVMQHGHIAQ RGNHDVLAQQ SGWYRDMYRY QQLEAALDDA PENREEAVDA