Gene EcolC_3162 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_3162 
Symbol 
ID6066527 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp3465609 
End bp3466181 
Gene Length573 bp 
Protein Length190 aa 
Translation table11 
GC content54% 
IMG OID641602578 
Productglycoprotein/polysaccharide metabolism 
Protein accessionYP_001726112 
Protein GI170021158 
COG category[S] Function unknown 
COG ID[COG3126] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACTCG TGCACATGGC CAGTGGTTTA GCGGTTGCGA TTGCGTTGGC GGCTTGCGCA 
GATAAAAGCG CGGATATTCA GACGCCAGCA CCGGCTGCAA ATACGTCTAT TTCAGCAACA
CAACAACCAG CTATCCAGCA ACCGAATGTC TCCGGTACCG TCTGGATCCG TCAGAAAGTC
GCACTGCCGC CTGATGCTGT GCTGACCGTG ACACTTTCTG ACGCGTCGTT AGCCGATGCA
CCGTCAAAAG TGCTGGCGCA GAAAGCGGTG CGTACTGAAG GTAAACAGTC ACCATTCAGC
TTTGTTCTGC CATTTAACCC GGCAGATGTT CAGCCGAACG CGCGTATTCT GTTGAGTGCG
GCGATTACCG TGAATGACAA ACTGGTATTT ATCACCGATA CCGTTCAGCC GGTGATCAAC
CAGGGCGGAA CTAAAGCCGA CCTGACATTG GTGCCGGTAC AGCAAACCGC CGTGCCGGTT
CAGGCCAGCG GTGGCGCAAC GACTACCGTA CCTTCGACTT CACCAACTCA GGTGAATCCG
TCTTCGGCAG TTCCAGCTCC TACGCAATAT TAA
 
Protein sequence
MKLVHMASGL AVAIALAACA DKSADIQTPA PAANTSISAT QQPAIQQPNV SGTVWIRQKV 
ALPPDAVLTV TLSDASLADA PSKVLAQKAV RTEGKQSPFS FVLPFNPADV QPNARILLSA
AITVNDKLVF ITDTVQPVIN QGGTKADLTL VPVQQTAVPV QASGGATTTV PSTSPTQVNP
SSAVPAPTQY