Gene EcolC_3127 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_3127 
Symbol 
ID6066384 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp3425181 
End bp3426098 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content53% 
IMG OID641602543 
Productband 7 protein 
Protein accessionYP_001726077 
Protein GI170021123 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0330] Membrane protease subunits, stomatin/prohibitin homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000985996 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCTTATCT TTATCCCGAT TCTCATTTTT GTCGCGCTGG TCATTGTCGG CGCGGGTGTC 
AAAATCGTAC CGCAGGGCTA TCAGTGGACA GTAGAACGCT TTGGTCGCTA TACCAAAACG
TTACAGCCGG GGCTCAGTCT GGTGGTGCCG TTTATGGATC GCATTGGTCG CAAGATCAAT
ATGATGGAGC AAGTGCTCGA TATCCCTTCC CAGGAAGTTA TCTCGAAAGA TAACGCCAAC
GTTACCATCG ACGCCGTGTG CTTTATTCAG GTGATTGACG CGCCGCGCGC GGCTTATGAA
GTCAGCAATC TGGAGCTGGC GATCATCAAC CTGACCATGA CTAACATCCG TACCGTGCTG
GGTTCAATGG AACTTGACGA AATGCTCTCT CAGCGCGACA GCATCAACTC ACGCCTGCTG
CGTATTGTCG ATGAAGCCAC CAACCCGTGG GGGATTAAAG TCACCCGTAT TGAAATTCGC
GACGTGCGCC CACCGGCAGA GCTTATCTCT TCAATGAACG CGCAGATGAA AGCGGAACGT
ACCAAACGCG CTTACATTCT TGAAGCGGAA GGGATCCGTC AGGCGGAAAT CCTCAAAGCC
GAAGGTGAAA AACAGTCGCA AATCCTGAAA GCGGAAGGCG AACGTCAGTC GGCGTTTTTA
CAGGCTGAAG CGCGTGAACG TTCCGCCGAA GCAGAAGCCC GCGCCACCAA AATGGTGTCT
GAAGCTATCG CCTCCGGTGA TATTCAGGCG GTGAACTACT TCGTAGCGCA GAAATACACC
GAAGCGTTAC AGCAGATCGG TTCCTCCAGT AACAGCAAAG TAGTGATGAT GCCATTAGAG
GCCAGCAGCC TGATGGGGTC GATTGCCGGG ATTGCCGAGC TGGTGAAAGA CAGCGCCAAC
AAACGGACTC AGCCATGA
 
Protein sequence
MLIFIPILIF VALVIVGAGV KIVPQGYQWT VERFGRYTKT LQPGLSLVVP FMDRIGRKIN 
MMEQVLDIPS QEVISKDNAN VTIDAVCFIQ VIDAPRAAYE VSNLELAIIN LTMTNIRTVL
GSMELDEMLS QRDSINSRLL RIVDEATNPW GIKVTRIEIR DVRPPAELIS SMNAQMKAER
TKRAYILEAE GIRQAEILKA EGEKQSQILK AEGERQSAFL QAEARERSAE AEARATKMVS
EAIASGDIQA VNYFVAQKYT EALQQIGSSS NSKVVMMPLE ASSLMGSIAG IAELVKDSAN
KRTQP