Gene EcolC_3126 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_3126 
Symbol 
ID6066373 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp3424358 
End bp3425035 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content45% 
IMG OID641602542 
Productputative ABC transporter ATP-binding protein YbbL 
Protein accessionYP_001726076 
Protein GI170021122 
COG category[R] General function prediction only 
COG ID[COG4619] ABC-type uncharacterized transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000946354 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCAGGAAA ATAGTCCTTT GCTTCAGCTA CAAAACGTAG GATATCTGGC GGGTGATGCG 
AAGATTCTTA ATAACATCAA TTTTTCGCTG CGTGCTGGCG AATTTAAGTT AATTACCGGT
CCTTCTGGTT GTGGCAAAAG TACGCTGCTA AAAATAGTTG CTTCATTGAT CAGCCCAACC
AGCGGAACGT TACTGTTTGA AGGTGAGGAT GTCAGCACAC TAAAGCCAGA AATCTACCGC
CAACAAGTCT CTTACTGCGC CCAGACACCG ACGCTGTTTG GCGATACGGT ATACGATAAT
CTGATCTTTC CCTGGCAGAT CCGTAACCGG CAGCCTGACC CAGCCATTTT TCTCGATTTT
CTCGAACGCT TCGCCTTGCC GGACAGCATT TTGACGAAGA ATATCGCCGA GCTATCTGGT
GGTGAAAAAC AACGCATCTC ATTGATTCGT AACCTGCAAT TTATGCCGAA GGTTTTATTG
CTGGATGAAA TAACCAGTGC GCTGGATGAA AGTAATAAAC ATAACGTCAA TGAGATGATC
CATCGTTATG TGCGCGAGCA AAATATTGCC GTGCTGTGGG TGACACACGA TAAAGACGAA
ATTAATCATG CGGATAAAGT GATTACACTG CAACCGCATG CCGGAGAAAT GCAGGAAGCA
CGCTATGAAC TCGCATAA
 
Protein sequence
MQENSPLLQL QNVGYLAGDA KILNNINFSL RAGEFKLITG PSGCGKSTLL KIVASLISPT 
SGTLLFEGED VSTLKPEIYR QQVSYCAQTP TLFGDTVYDN LIFPWQIRNR QPDPAIFLDF
LERFALPDSI LTKNIAELSG GEKQRISLIR NLQFMPKVLL LDEITSALDE SNKHNVNEMI
HRYVREQNIA VLWVTHDKDE INHADKVITL QPHAGEMQEA RYELA