Gene EcolC_3124 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_3124 
Symbol 
ID6066363 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp3422675 
End bp3423529 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content56% 
IMG OID641602540 
Productthioredoxin domain-containing protein 
Protein accessionYP_001726074 
Protein GI170021120 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG3118] Thioredoxin domain-containing protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000112242 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCCGTAG AAAATATTGT CAACATTAAC GAATCTAACC TGCAACAGGT TCTTGAACAG 
TCGATGACCA CTCCGGTGCT GTTCTATTTT TGGTCTGAAC GTAGCCAGCA CTGTTTGCAG
TTAACCCCGA TCCTGGAAAG CCTCGCGGCG CAGTACAACG GGCAATTTAT TCTGGCGAAG
CTGGACTGCG ACGCGGAGCA GATGATTGCC GCCCAGTTTG GTCTGCGCGC GATTCCGACC
GTGTATCTGT TCCAGAACGG GCAACCGGTA GATGGCTTCC AGGGGCCGCA ACCGGAAGAG
GCGATCCGCG CCCTGCTGGA TAAAGTGCTG CCGCGCGAAG AAGAGCTGAA AGCGCAGCAG
GCGATGCAAC TGATGCAGGA AAGCAATTAC ACCGATGCCC TGCCATTGCT GAAAGACGCC
TGGCAGTTGT CGAATCAGAA CGGGGAGATC GGCCTGCTGC TGGCAGAAAC GCTGATTGCG
CTGAACCGTT CTGAAGATGC GGAAGCGGTG CTGAAAACCA TTCCGTTGCA GGATCAGGAC
ACCCGCTACC AGGGGCTGGT GGCGCAAATC GAACTGCTGA AGCAGGCGGC TGATACTCCG
GAAATTCAAC AGTTGCAACA GCAGGTGGCG GAGAATCCAG AAGATGCCGC ACTGGCGACG
CAACTGGCGC TGCAACTGCA TCAGGTTGGG CGCAATGAAG AGGCGCTGGA GTTGCTGTTC
GGGCATCTGC GTAAAGATCT CACCGCCGCA GACGGTCAGA CGCGTAAAAC GTTCCAGGAG
ATCCTCGCTG CGCTGGGTAC GGGTGATGCA CTGGCGTCGA AGTATCGCCG CCAGCTGTAT
GCATTGTTGT ATTGA
 
Protein sequence
MSVENIVNIN ESNLQQVLEQ SMTTPVLFYF WSERSQHCLQ LTPILESLAA QYNGQFILAK 
LDCDAEQMIA AQFGLRAIPT VYLFQNGQPV DGFQGPQPEE AIRALLDKVL PREEELKAQQ
AMQLMQESNY TDALPLLKDA WQLSNQNGEI GLLLAETLIA LNRSEDAEAV LKTIPLQDQD
TRYQGLVAQI ELLKQAADTP EIQQLQQQVA ENPEDAALAT QLALQLHQVG RNEEALELLF
GHLRKDLTAA DGQTRKTFQE ILAALGTGDA LASKYRRQLY ALLY