Gene EcolC_3109 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_3109 
Symbol 
ID6066298 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp3404510 
End bp3405655 
Gene Length1146 bp 
Protein Length381 aa 
Translation table11 
GC content56% 
IMG OID641602525 
Productglycerate kinase II 
Protein accessionYP_001726059 
Protein GI170021105 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1929] Glycerate kinase 
TIGRFAM ID[TIGR00045] glycerate kinase 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.574239 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGATTG TCATTGCGCC AGACTCTTTT AAAGAGAGCT TAAGTGCAGA AAAATGTTGC 
CAGGCAATTA AAGCCGGGTT TTCGACCCTC TTTCCCGATG CGCACTATAT CTGTTTGCCG
ATAGCGGATG GCGGCGAAGG AACGGTGGAT GCGATGGTCG CCGCGACGGG CGGCAACATC
GTGACGCTTG AAGTCTGCGG GCCGATGGGC GAAACAGTGA ATGCTTTTTA TGGCCTTACC
GGCGACGGGA AAACGGCGGT GATTGAGATG GCGGCAGCAA GTGGCCTGAT GCTGGTCGCG
CCTGAAAAGC GTAATCCGTT GCTGGCCTCC AGTTTTGGTA CGGGGGAGTT AATTCGTCAT
GCGCTGGATA ACGGCATTCG CCATATTATT CTCGGCATTG GCGGCAGTGC GACGGTCGAC
GGCGGTATGG GCATGGCGCA GGCGCTCGGT GTGCGTTTCC TTGATGCCGA CGGTCAGGTG
CTGGTGGCTA ACGGCGGTAA TTTAGCGCGC GTGGCAAGCA TTGAGATGGA TGAATGCGAT
CCGCGTCTGG CGAATTGCCA TATTGAAGTA GCATGTGACG TTGATAACCC GCTGGTAGGG
GCACGCGGCG CGGCGGCGGT GTTTGGCCCG CAAAAAGGGG CAACGCCGGA AATGGTCGAA
GAGCTGGAAC AGGGGCTGCA AAATTACGCC CGTGTTTTAC AACAGCAAAC TGAAATCAAC
GTCTGCCAGA TGGCGGGCGG CGGCGCTGCG GGCGGTATGG GTATTGCGGC GGCGGTATTT
CTCAATGCGG ATATTAAACC AGGTATTGAG ATTGTGTTGA ATGCGGTCAA TCTTGCGCAG
GCAGTGCAGG GCGCAGCACT GGTGATTACC GGGGAAGGGC GCATCGACTC GCAAACGGCA
GGCGGTAAAG CGCCGCTGGG TGTGGCGTCG GTGGCGAAGC AGTTTAATGT ACCGGTGATT
GGGATTGCTG GCGTATTGGG TGATGGCGTG GAAGTGGTGC ACCAGTATGG CATTGATGCG
GTATTCAGCA TTTTGCCACG TCTGGCACCT TTAGCCGAAG TACTCGCCAG CGGTGAAATC
AATCTCTTCA ACAGCGCGCG AAATATTGCC TGCGCCATTA AAATAGGTCA GGGAATTAAA
AACTGA
 
Protein sequence
MKIVIAPDSF KESLSAEKCC QAIKAGFSTL FPDAHYICLP IADGGEGTVD AMVAATGGNI 
VTLEVCGPMG ETVNAFYGLT GDGKTAVIEM AAASGLMLVA PEKRNPLLAS SFGTGELIRH
ALDNGIRHII LGIGGSATVD GGMGMAQALG VRFLDADGQV LVANGGNLAR VASIEMDECD
PRLANCHIEV ACDVDNPLVG ARGAAAVFGP QKGATPEMVE ELEQGLQNYA RVLQQQTEIN
VCQMAGGGAA GGMGIAAAVF LNADIKPGIE IVLNAVNLAQ AVQGAALVIT GEGRIDSQTA
GGKAPLGVAS VAKQFNVPVI GIAGVLGDGV EVVHQYGIDA VFSILPRLAP LAEVLASGEI
NLFNSARNIA CAIKIGQGIK N