Gene EcolC_3100 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_3100 
Symbol 
ID6066260 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp3393806 
End bp3394873 
Gene Length1068 bp 
Protein Length355 aa 
Translation table11 
GC content56% 
IMG OID641602517 
Productphosphoribosylaminoimidazole carboxylase ATPase subunit 
Protein accessionYP_001726051 
Protein GI170021097 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0026] Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) 
TIGRFAM ID[TIGR01161] phosphoribosylaminoimidazole carboxylase, PurK protein 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.75749 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACAGG TTTGCGTCCT CGGTAACGGG CAGTTAGGCC GTATGCTGCG TCAGGCAGGC 
GAACCGTTAG GCATTGCTGT CTGGCCAGTC GGGCTGGACG CTGAACCGGC GGCGGTGCCT
TTTCAACAAA GCGTGATTAC CGCTGAGATA GAACGCTGGC CGGAAACCGC ATTAACCCGC
GAGCTGGCGC GCCATCCGGC CTTTGTGAAC CGCGATGTGT TCCCGATTAT TGCTGACCGT
CTGACTCAGA AGCAGCTTTT CGATAAGCTC CACCTGCCGA CTGCACCGTG GCAGTTACTT
GCCGAACGCA GCGAGTGGCC TGCGGTGTTT GATCGTTTAG GTGAGCTGGC GATTGTTAAG
CGTCGCACTG GTGGTTATGA CGGTCGCGGT CAATGGCGTT TACGCGCAAA TGAAACCGAA
CAGTTACCGG CAGAGTGTTA CGGCGAATGT ATTGTCGAGC AGGGCATTAA CTTCTCTGGT
GAAGTGTCGC TGGTTGGCGC GCACGGCTTT GATGGCAGCA CCGTGTTTTA TCCGCTGACG
CATAACCTGC ATCAGGACGG TATTTTGCGC ACCAGCGTCG CTTTTCCGCA GGCCAACGCA
CAGCAGCAGG CGCAAGCCGA AGAGATGCTG TCGGCGATTA TGCAGGAGCT GGGCTATGTG
GGCGTGATGG CGATGGAGTG TTTTGTCACC CCGCAAGGTC TGCTGATCAA CGAACTGGCT
CCGCGTGTGC ATAACAGCGG TCACTGGACA CAAAACGGTG CCAGCATCAG CCAGTTTGAG
CTGCATCTGC GGGCGATTAC CGATCTGCCG TTACCGCAAC CAGTGGTGAA TAATTCGTCG
GTGATGATCA ATCTGATTGG TAGCGATGTG AATTATGACT GGCTGAAACT GCCGCTGGTG
CATCTGCACT GGTACGACAA AGAAGTCCGT CCGGGCCGTA AAGTGGGGCA TCTGAATTTG
ACCGACAGCG ACACATCGCG TCTGTCCGCG ACGCTGGAAG CCTTAATCCC GCTGCTGCCG
CCGGAATATG CCAGCGGCGT GATGTGGGCA CAGAGTAAGT TCAGTTAA
 
Protein sequence
MKQVCVLGNG QLGRMLRQAG EPLGIAVWPV GLDAEPAAVP FQQSVITAEI ERWPETALTR 
ELARHPAFVN RDVFPIIADR LTQKQLFDKL HLPTAPWQLL AERSEWPAVF DRLGELAIVK
RRTGGYDGRG QWRLRANETE QLPAECYGEC IVEQGINFSG EVSLVGAHGF DGSTVFYPLT
HNLHQDGILR TSVAFPQANA QQQAQAEEML SAIMQELGYV GVMAMECFVT PQGLLINELA
PRVHNSGHWT QNGASISQFE LHLRAITDLP LPQPVVNNSS VMINLIGSDV NYDWLKLPLV
HLHWYDKEVR PGRKVGHLNL TDSDTSRLSA TLEALIPLLP PEYASGVMWA QSKFS