Gene EcolC_3089 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_3089 
Symbol 
ID6066234 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp3383074 
End bp3384081 
Gene Length1008 bp 
Protein Length335 aa 
Translation table11 
GC content45% 
IMG OID641602506 
Productfimbrial asembly protein 
Protein accessionYP_001726040 
Protein GI170021086 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3539] P pilus assembly protein, pilin FimA 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.596459 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGATAA TCTGCAGATT ATTATTGGCG ATGGCATGTT TGTGGTTAAC AAACATATCC 
TGGGCTACTG TTTGTGCAAA TAGTACTGGC GTAGCAGAAG ATGAACACTA TGATCTCTCA
AATATCTTTA ATAGCACCAA TAACCAGCCA GGGCAGATTG TTGTTTTACC GGAAAAATCC
GGCTGGGTAG GTGTCTCAGC AATTTGTCCA CCCGGTACGC TGGTGAATTA TACATACCGT
AGTTATGTCA CCAACTTTAT TGTTCAGGAA ACTATCGATA ATTATAAATA TATGCAATTA
CATGATTATC TATTAGGTGC GATGAGTCTG GTTGATAGTG TGATGGATAT TCAGTTCCCC
CCGCAAAATT ATATTCGGAT GGGAACAGAT CCTAACGTTT CGCAAAACCT TCCATTCGGG
GTGATGGATT CTCGTTTAAT ATTTCGTTTA AAGGTTATTC GTCCCTTTAT TAACATGGTG
GAGATCCCCA GACAGGTGAT GTTTACCGTG TATGTGACAT CAACGCCTTA CGATCCGTTG
GTTACACCTG TTTATACCAT TAGTTTTGGT GGCCGGGTTG AAGTGCCGCA AAACTGCGAA
TTAAATGCCG GGCAGATTGT TGAATTTGAT TTTGGTGATA TCGGCGCATC GTTATTTAGT
GCGGCAGGGC CGGGGAATCG ACCAGCTGGC GTCATGCCGC AAACCAAGAG CATTGCGGTC
AAATGTACGA ATGTTGCTGC GCAGGCTTAT TTAACAATGC GTCTGGAAGC CAGTGCCGTT
TCTGGTCAGG CGATGGTGTC GGACAATCAG GATTTAGGTT TTATTGTCGC CGATCAGAAC
GATACGCCGA TTACGCCTAA CGATCTCAAT AGCGTTATTC CTTTCCGTCT GGATGCAGCT
GCGGCAGCCA ATGTCACACT TCGCGCCTGG CCTATCAGTA TTACCGGTCA AAAACCGACC
GAGGGGCCGT TTAGCGCGCT GGGGTATTTA CGCGTCGATT ATCAATGA
 
Protein sequence
MKIICRLLLA MACLWLTNIS WATVCANSTG VAEDEHYDLS NIFNSTNNQP GQIVVLPEKS 
GWVGVSAICP PGTLVNYTYR SYVTNFIVQE TIDNYKYMQL HDYLLGAMSL VDSVMDIQFP
PQNYIRMGTD PNVSQNLPFG VMDSRLIFRL KVIRPFINMV EIPRQVMFTV YVTSTPYDPL
VTPVYTISFG GRVEVPQNCE LNAGQIVEFD FGDIGASLFS AAGPGNRPAG VMPQTKSIAV
KCTNVAAQAY LTMRLEASAV SGQAMVSDNQ DLGFIVADQN DTPITPNDLN SVIPFRLDAA
AAANVTLRAW PISITGQKPT EGPFSALGYL RVDYQ