Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcolC_3082 |
Symbol | |
ID | 6066203 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli ATCC 8739 |
Kingdom | Bacteria |
Replicon accession | NC_010468 |
Strand | + |
Start bp | 3373110 |
End bp | 3374246 |
Gene Length | 1137 bp |
Protein Length | 378 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 641602498 |
Product | transposase IS4 family protein |
Protein accession | YP_001726033 |
Protein GI | 170021079 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG5433] Transposase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAACTTA AAAAATTGAT GGAACATATT TCTATTATCC CCGATTACAG ACAAGCCTGG AAAGTGGAAC ATAAATTATC GGATATTCTA CTGTTGACTA TTTGTGCCGT TATTTCTGGT GCAGAGGGTT GGGAAGATAT AGAGGATTTT GGGGAAACAC ATCTCGATTT TTTGAAGCAA TATGGTGATT TTGAAAATGG CATTCCTGTT CACGATACCA TTGCCAGAGT TGTATCCTGT ATCAGTCCTG CAAAATTTCA CGAGTGCTTT ATTAACTTGA TGCGTGATTG TCATTCTTCA GATGATAAAG ACGTCATTGC AATTGATGGA AAAACGCTCC GGCACTCTTC TGACAAGAGT CACCGCAGGG GAGCGATTCA TGTCATTAGT GCGTTCTCAA CAATGCACAG TCTGGTCATC GGACAGATCA AGACGGATAA GAAATCTAAT GAGATTACAG CTATCCCTGA ACTTATTAAC ATGCTGGATA TTAAAGGAAA AATCATCACA ACCGATGCGA TGGGTTGCCA GAAAGATATT GCAGAGAAGA TACAAAAACA GGGATGTGAT TATTTATTCG CGGTAAAAGG AAACCAGGGG CGGCTAAATA AAGCCTTTGA GGAAAAATTT CCGCTGAAAG AATTAAATAA TCCAGAGCAT GACAGTTACG CAATGAGTGA AAAGAGTCAC GGCAGAGAAG AAATCCGTCT TCATATTGTT TGCGATGTCC CTGATGAACT TATTGATTTC ACGTTTGAAT GGAAAGGGCT AAAGAAATTA TGCGTGGCAG TCTCCTTTCG GTCCATAATA GCAGAACAAA AGAAAGAGCC AGAAATGACG GTCAGATATT ATATCAGTTC TGTTGATTTA ACCGCAGAGA AGTTCGCCAC AGCAATCCGA AACCACTGGC ACGTGGAGAA TAAGCTGCAC TGGCGTCTGG ACGTGGTAAT GAATGAAGAC GACTGCAAAA TAAGAAGAGG AAATGCAGCA GAATTATTTT CAGGGATACG GCACATCGCT ATTAATATTT TGACTAATGA TAAGGTATTC AAGGCAGGGT TAAGACGTAA GATGCAAAAA GCAGCCATGG AGAGAAACTA TCTGGCGTCA GTCCTTGCGG GGAACGGGCT TTCGTAA
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Protein sequence | MELKKLMEHI SIIPDYRQAW KVEHKLSDIL LLTICAVISG AEGWEDIEDF GETHLDFLKQ YGDFENGIPV HDTIARVVSC ISPAKFHECF INLMRDCHSS DDKDVIAIDG KTLRHSSDKS HRRGAIHVIS AFSTMHSLVI GQIKTDKKSN EITAIPELIN MLDIKGKIIT TDAMGCQKDI AEKIQKQGCD YLFAVKGNQG RLNKAFEEKF PLKELNNPEH DSYAMSEKSH GREEIRLHIV CDVPDELIDF TFEWKGLKKL CVAVSFRSII AEQKKEPEMT VRYYISSVDL TAEKFATAIR NHWHVENKLH WRLDVVMNED DCKIRRGNAA ELFSGIRHIA INILTNDKVF KAGLRRKMQK AAMERNYLAS VLAGNGLS
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