Gene EcolC_3082 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_3082 
Symbol 
ID6066203 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp3373110 
End bp3374246 
Gene Length1137 bp 
Protein Length378 aa 
Translation table11 
GC content41% 
IMG OID641602498 
Producttransposase IS4 family protein 
Protein accessionYP_001726033 
Protein GI170021079 
COG category[L] Replication, recombination and repair 
COG ID[COG5433] Transposase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACTTA AAAAATTGAT GGAACATATT TCTATTATCC CCGATTACAG ACAAGCCTGG 
AAAGTGGAAC ATAAATTATC GGATATTCTA CTGTTGACTA TTTGTGCCGT TATTTCTGGT
GCAGAGGGTT GGGAAGATAT AGAGGATTTT GGGGAAACAC ATCTCGATTT TTTGAAGCAA
TATGGTGATT TTGAAAATGG CATTCCTGTT CACGATACCA TTGCCAGAGT TGTATCCTGT
ATCAGTCCTG CAAAATTTCA CGAGTGCTTT ATTAACTTGA TGCGTGATTG TCATTCTTCA
GATGATAAAG ACGTCATTGC AATTGATGGA AAAACGCTCC GGCACTCTTC TGACAAGAGT
CACCGCAGGG GAGCGATTCA TGTCATTAGT GCGTTCTCAA CAATGCACAG TCTGGTCATC
GGACAGATCA AGACGGATAA GAAATCTAAT GAGATTACAG CTATCCCTGA ACTTATTAAC
ATGCTGGATA TTAAAGGAAA AATCATCACA ACCGATGCGA TGGGTTGCCA GAAAGATATT
GCAGAGAAGA TACAAAAACA GGGATGTGAT TATTTATTCG CGGTAAAAGG AAACCAGGGG
CGGCTAAATA AAGCCTTTGA GGAAAAATTT CCGCTGAAAG AATTAAATAA TCCAGAGCAT
GACAGTTACG CAATGAGTGA AAAGAGTCAC GGCAGAGAAG AAATCCGTCT TCATATTGTT
TGCGATGTCC CTGATGAACT TATTGATTTC ACGTTTGAAT GGAAAGGGCT AAAGAAATTA
TGCGTGGCAG TCTCCTTTCG GTCCATAATA GCAGAACAAA AGAAAGAGCC AGAAATGACG
GTCAGATATT ATATCAGTTC TGTTGATTTA ACCGCAGAGA AGTTCGCCAC AGCAATCCGA
AACCACTGGC ACGTGGAGAA TAAGCTGCAC TGGCGTCTGG ACGTGGTAAT GAATGAAGAC
GACTGCAAAA TAAGAAGAGG AAATGCAGCA GAATTATTTT CAGGGATACG GCACATCGCT
ATTAATATTT TGACTAATGA TAAGGTATTC AAGGCAGGGT TAAGACGTAA GATGCAAAAA
GCAGCCATGG AGAGAAACTA TCTGGCGTCA GTCCTTGCGG GGAACGGGCT TTCGTAA
 
Protein sequence
MELKKLMEHI SIIPDYRQAW KVEHKLSDIL LLTICAVISG AEGWEDIEDF GETHLDFLKQ 
YGDFENGIPV HDTIARVVSC ISPAKFHECF INLMRDCHSS DDKDVIAIDG KTLRHSSDKS
HRRGAIHVIS AFSTMHSLVI GQIKTDKKSN EITAIPELIN MLDIKGKIIT TDAMGCQKDI
AEKIQKQGCD YLFAVKGNQG RLNKAFEEKF PLKELNNPEH DSYAMSEKSH GREEIRLHIV
CDVPDELIDF TFEWKGLKKL CVAVSFRSII AEQKKEPEMT VRYYISSVDL TAEKFATAIR
NHWHVENKLH WRLDVVMNED DCKIRRGNAA ELFSGIRHIA INILTNDKVF KAGLRRKMQK
AAMERNYLAS VLAGNGLS