| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcolC_3046 |
|---|
| Symbol | |
|---|
| ID | 6066092 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli ATCC 8739 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010468 |
|---|
| Strand | - |
|---|
| Start bp | 3325237 |
|---|
| End bp | 3327342 |
|---|
| Gene Length | 2106 bp |
|---|
| Protein Length | 701 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 641602462 |
|---|
| Product | carbon starvation protein CstA |
|---|
| Protein accession | YP_001725997 |
|---|
| Protein GI | 170021043 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG1966] Carbon starvation protein, predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACAAAT CAGGGAAATA CCTCGTCTGG ACAGTGCTCT CTGTAATGGG AGCATTTGCT
CTGGGATACA TTGCTTTAAA TCGTGGGGAA CAGATCAACG CGCTGTGGAT TGTGGTGGCG
TCGGTCTGTA TCTATCTGAT CGCTTACCGT TTTTATGGGC TGTATATCGC CAAAAATGTG
CTGGCGGTTG ACCCGACGCG TATGACGCCA GCGGTGCGCC ATAACGACGG GCTGGACTAT
GTGCCGACGG ACAAGAAAGT GCTGTTCGGT CACCATTTTG CGGCCATTGC CGGAGCAGGT
CCGCTGGTGG GGCCGGTACT GGCGGCGCAA ATGGGCTACC TGCCGGGGAT GATCTGGCTG
CTCGCTGGGG TGGTTCTCGC CGGTGCGGTG CAGGATTTCA TGGTGCTGTT TGTTTCTACG
CGCCGTGACG GTCGCTCGCT GGGTGAGCTG GTCAAAGAAG AGATGGGGCC AACCGCCGGG
GTGATTGCGC TGGTGGCCTG CTTTATGATC ATGGTCATTA TCCTTGCAGT GCTGGCGATG
ATCGTGGTGA AAGCCCTGAC TCATAGCCCG TGGGGAACAT ATACCGTTGC GTTCACCATT
CCGCTGGCGC TGTTTATGGG GATCTACCTG CGCTATCTGC GTCCGGGGCG TATTGGCGAA
GTGTCGGTCA TCGGTCTGGT ATTCCTGATT TTCGCCATTA TCTCTGGCGG CTGGGTGGCA
GAAAGTCCGA CCTGGGCACC GTACTTTGAC TTTACCGGCG TGCAGTTGAC CTGGATGCTG
GTGGGTTACG GTTTTGTGGC GGCGGTGCTG CCGGTGTGGT TACTGCTGGC CCCGCGTGAC
TACCTCTCTA CCTTCCTGAA AATCGGGACT ATCGTCGGTC TGGCGGTAGG CATTTTGATT
ATGCGCCCGA CGCTGACCAT GCCTGCGCTG ACCAAATTTG TCGATGGCAC TGGCCCGGTA
TGGACCGGTA ACCTGTTCCC GTTCCTGTTT ATCACCATCG CCTGTGGCGC GGTGTCTGGC
TTCCATGCGC TGATCTCTTC TGGGACCACG CCGAAGATGC TGGCGAACGA AGGGCAGGCG
TGCTTTATCG GCTACGGTGG GATGTTAATG GAATCCTTCG TGGCGATTAT GGCGCTGGTT
TCCGCCTGTA TCATCGATCC GGGCGTGTAT TTTGCCATGA ACAGCCCGAT GGCGGTGCTG
GCTCCGGCAG GGACGGCGGA TGTGGTCGCT TCTGCCGCGC AGGTGGTGAG TAGCTGGGGC
TTTAGCATTA CACCAGATAC GCTAAACCAG ATTGCCAGCG AAGTGGGTGA ACAGTCGATC
ATTTCCCGTG CGGGCGGTGC GCCGACGCTG GCGGTGGGGA TGGCCTACAT TCTGCACGGC
GCGCTGGGCG GCATGATGGA TGTGGCGTTC TGGTATCACT TCGCCATTTT GTTTGAAGCA
CTGTTTATTC TGACGGCGGT GGATGCAGGT ACGCGTGCTG CGCGCTTTAT GTTGCAGGAT
CTGCTGGGCG TGGTGTCTCC TGGCCTGAAG CGGACCGATT CACTGCCTGC TAACCTGCTG
GCAACAGCGC TGTGCGTACT GGCGTGGGGC TACTTCCTCC ATCAGGGCGT GGTCGATCCG
CTGGGCGGCA TTAACACTCT GTGGCCGCTG TTTGGTATTG CCAACCAGAT GCTGGCAGGG
ATGGCGCTGA TGCTCTGTGC CGTGGTGTTG TTCAAGATGA AACGTCAACG TTACGCCTGG
GTGGCGCTGG TACCAACGGC CTGGCTGCTG ATTTGTACCC TGACCGCAGG CTGGCAGAAA
GCGTTTAGCC CGGATGCGAA AGTCGGCTTC CTGGCCATTG CTAATAAGTT CCAGGCAATG
ATCGACAGCG GCAATATTCC GTCGCAGTAT ACTGAGTCAC AGCTGGCGCA ACTGGTGTTC
AACAACCGTC TGGATGCCGG GTTAACCATC TTCTTTATGG TGGTCGTGGT GGTTCTGGCA
CTGTTCTCGA TTAAGACGGC ACTTGCGGCA TTGAAAGATC CGAAGCCAAC GGCGAAAGAA
ACGCCGTATG AACCAATGCC GGAAAATGTC GAGGAGATCG TGGCGCAGGC AAAAGGCGCA
CACTAA
|
|---|
| Protein sequence | MNKSGKYLVW TVLSVMGAFA LGYIALNRGE QINALWIVVA SVCIYLIAYR FYGLYIAKNV
LAVDPTRMTP AVRHNDGLDY VPTDKKVLFG HHFAAIAGAG PLVGPVLAAQ MGYLPGMIWL
LAGVVLAGAV QDFMVLFVST RRDGRSLGEL VKEEMGPTAG VIALVACFMI MVIILAVLAM
IVVKALTHSP WGTYTVAFTI PLALFMGIYL RYLRPGRIGE VSVIGLVFLI FAIISGGWVA
ESPTWAPYFD FTGVQLTWML VGYGFVAAVL PVWLLLAPRD YLSTFLKIGT IVGLAVGILI
MRPTLTMPAL TKFVDGTGPV WTGNLFPFLF ITIACGAVSG FHALISSGTT PKMLANEGQA
CFIGYGGMLM ESFVAIMALV SACIIDPGVY FAMNSPMAVL APAGTADVVA SAAQVVSSWG
FSITPDTLNQ IASEVGEQSI ISRAGGAPTL AVGMAYILHG ALGGMMDVAF WYHFAILFEA
LFILTAVDAG TRAARFMLQD LLGVVSPGLK RTDSLPANLL ATALCVLAWG YFLHQGVVDP
LGGINTLWPL FGIANQMLAG MALMLCAVVL FKMKRQRYAW VALVPTAWLL ICTLTAGWQK
AFSPDAKVGF LAIANKFQAM IDSGNIPSQY TESQLAQLVF NNRLDAGLTI FFMVVVVVLA
LFSIKTALAA LKDPKPTAKE TPYEPMPENV EEIVAQAKGA H
|
|---|
| |