Gene EcolC_3042 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_3042 
Symbol 
ID6066083 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp3321872 
End bp3322489 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content47% 
IMG OID641602458 
Productnuclease 
Protein accessionYP_001725993 
Protein GI170021039 
COG category[K] Transcription 
COG ID[COG1475] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACAAC GATTAACGCA GGATTTAACG CAATTTCTCG CCAGCTTGCC GGAAGACGAT 
CGCATCAAAG CGATTAATGA AATCCGCATG GCGATCCATC AGGTAAGTCC TTTTCGGGAA
GAACCGGTAG ATTGTGTTTT GTGGGTCAAA AATGATCAGC TTGTGCCGAA TGATTACAAC
CCAAACAACG TGGCACCACC CGAAAAAAAA CTGCTGAAAA AATCCATTGA AATAGATGGT
TTTACCCAAC CCATTGTGGT CACGCATACG GATAAAAATG CCCTGGAAAT CGTGGATGGT
TTTCACCGCC ATGAAATTGG TAAAGGCTCA TCATCGTTAA AATTACGCTT AAAAGGTTAT
TTGCCGGTGA CCTGTCTGGA AGGTACGCGT AATCAACGCA TAGCCGCGAC TATTCGTCAT
AATCGCGCTC GTGGACGCCA TCAAATCACC GCCATGTCGG AAATCGTCCG TGAACTTAGC
CAGTTGGGAT GGGACGATAA TAAAATTGGC AAAGAGCTGG GAATGGACAG CGACGAAGTG
CTGCGCCTGA AGCAAATTAA CGGCCTGCAA GAGTTGTTTG CCGACCGTCA ATATTCCCGC
GCCTGGACGG TTAAATAG
 
Protein sequence
MQQRLTQDLT QFLASLPEDD RIKAINEIRM AIHQVSPFRE EPVDCVLWVK NDQLVPNDYN 
PNNVAPPEKK LLKKSIEIDG FTQPIVVTHT DKNALEIVDG FHRHEIGKGS SSLKLRLKGY
LPVTCLEGTR NQRIAATIRH NRARGRHQIT AMSEIVRELS QLGWDDNKIG KELGMDSDEV
LRLKQINGLQ ELFADRQYSR AWTVK