Gene EcolC_3028 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_3028 
Symbol 
ID6066029 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp3306746 
End bp3307654 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content58% 
IMG OID641602444 
Productcitrate lyase, beta subunit 
Protein accessionYP_001725979 
Protein GI170021025 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2301] Citrate lyase beta subunit 
TIGRFAM ID[TIGR01588] citrate lyase, beta subunit 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTTCCG CTTCGCTGCA ACAACGTAAA ACTCGCACCC GCCGCAGCAT GTTGTTTGTG 
CCTGGTGCCA ATGCCGCGAT GGTCAGCAAC TCCTTCATCT ACCCGGCTGA TGCCCTGATG
TTTGACCTCG AAGACTCCGT AGCATTGCGT GAAAAAGACA CCGCCCGCCG CATGGTTTAC
CACGCGCTGC AACATCCGCT GTATCGCGAT ATTGAAACCA TTGTGCGTGT CAACGCGCTG
GATTCCGAAT GGGGTGTCAA CGACCTGGAA GCCGTCGTTC GCGGTGGTGC GGACGTTGTG
CGTCTGCCGA AAACCGATAC CGCTCAGGAT GTTCTGGATA TCGAAAAAGA GATCCTGCGT
ATCGAAAAAG CCTGTGGTCG TGAACCCGGC AGCACCGGCC TGCTGGCGGC GATTGAATCT
CCGCTGGGCA TTACCCGCGC AGTGGAAATC GCTCACGCTT CCGAGCGTTT GATCGGTATC
GCCCTCGGTG CAGAAGACTA TGTGCGCAAC CTGCGTACAG AACGCTCCCC GGAAGGAACT
GAACTGCTGT TCGCTCGCTG CTCCATTTTG CAGGCCGCGC GCTCTGCGGG TATTCAGGCG
TTCGATACCG TCTATTCCGA CGCTAACAAC GAAGCTGGAT TCCTGCAAGA AGCCGCCCAC
ATCAAACAGC TGGGCTTTGA CGGCAAATCG CTGATCAACC CGCGTCAGAT TGATCTGCTG
CACAACCTCT ACGCACCGAC CCAGAAAGAA GTGGATCACG CCCGCCGCGT CGTAGAAGCC
GCTGAAGCCG CCGCTCGCGA AGGCCTCGGC GTGGTTTCCC TGAACGGCAA GATGGTGGAC
GGTCCGGTTA TCGATCGCGC CCGTCTGGTG CTCTCCCGTG CAGAACTTTC CGGCATCCGC
GAAGAATAA
 
Protein sequence
MISASLQQRK TRTRRSMLFV PGANAAMVSN SFIYPADALM FDLEDSVALR EKDTARRMVY 
HALQHPLYRD IETIVRVNAL DSEWGVNDLE AVVRGGADVV RLPKTDTAQD VLDIEKEILR
IEKACGREPG STGLLAAIES PLGITRAVEI AHASERLIGI ALGAEDYVRN LRTERSPEGT
ELLFARCSIL QAARSAGIQA FDTVYSDANN EAGFLQEAAH IKQLGFDGKS LINPRQIDLL
HNLYAPTQKE VDHARRVVEA AEAAAREGLG VVSLNGKMVD GPVIDRARLV LSRAELSGIR
EE