| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcolC_2989 |
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| Symbol | |
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| ID | 6065853 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli ATCC 8739 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010468 |
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| Strand | - |
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| Start bp | 3267154 |
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| End bp | 3269031 |
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| Gene Length | 1878 bp |
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| Protein Length | 625 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641602406 |
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| Product | YVTN beta-propeller repeat-containing protein |
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| Protein accession | YP_001725941 |
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| Protein GI | 170020987 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) |
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| TIGRFAM ID | [TIGR02276] 40-residue YVTN family beta-propeller repeat |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGCAT CTTCGGTTAA GCCGTTAAAT GTTCAATTAC CCGCAATAAC CCTTATCCTT
TTTGCGCTCT GTGTTGGGAT ATTTTGTTAC CTCGCACAAT GGATGAGTTA TGAAGAAGTC
GATCAATCCG CACTCATCCA TCTCGGTGCT AACGTTGCTT CACTCTCGTT GTCGGGTGAA
CCCTGGCGCT TATTGAGCAG TGTCTTTCTG CACAGTAGTT TTTCCCATTT GCTGATGAAT
ATGTTTGCAC TCCTGGTGGT GGGGGCAGTG ACGGAACGGA TACTGGGGAA ATGGCGACTT
CTGATTATTT GGTTATTCTC CGGCGTCTTT GGTGGGCTCA TCAGCGCCTG TTATGCGTTA
CGCGATAGTG ATCAGATAGT CATCAGCGTT GGGGCATCCG GGGCAATTAT GGGAATAGCT
GGCGCTGCGA TAGCAACACA GCTTGCTTCA GGTACGGGCA CACACCATAA AAACCAGCGG
CGAGTATTTC CTCTGTTGGG TATGGTGGCG CTGACACTGT TGTACGGTGC CCGGCAAACA
GGAATAGATA ACGCTTGCCA CATTGGCGGC CTGATTGCGG GTGGCGCGTT GGGTTGGCTG
AGCGCGCGTT TATCTGGGCA AAACCGACTC GTTACGGAAG GCGGGATTAT TGTTGCGGGC
AGTCTTCTTC TGACCGGGGC TATCTGGCTT GCGCAGCAGC AGATGGATGA GTCAGTTTTA
CAGGTCAGGC AAAGCCTGCG TGAAGAGTTT TATCCGCAGG AGATTGAACA AGAGCGACGA
CAAAAAAAAC AACAGTTAGC GGAGGAACGC AACGCCCTCA GGGAAACATT ATCCGCTCCG
GTAAGTCGTG AACAGGCCAG TGGTGATTTG CTCGCTGAGA TTGCCGATAT CCATGATATG
GCGATCAGTC GGGATGGTAA TACGTTGTAT GCCGCAATTG AAAACACCAA CAGCATTGTT
GTTTTCGACC TCGGACAAAA GAAAATCCTG CATACCTTTA CAGCCCCCAT AGCGAAAGAA
AAGTCAGTCA AACATTGTGG TGGCTGTAAA GATCAGGGCG TCAGATCGCT GACGCTAAGC
CCGGATGAAA CGTTGCTTTA TGCGACTTCA TTTGAAGCGA ATGCGTTATC GGTCATTAAC
GTGGCGACGG GGGAGATTAT TCAGTCGATT ACCACCGGTG CACATCCTGA CAGTCTTATC
CTCTCGCGTG ATGGCACAAA AGCCTGGGTG ATGAATCGCA CCAGTAATAG TGTGTCAGCG
ATTGATCTGG TGACTTATCA GCATGTGGCG GATATCCCGC TGGAGAAATA CGACGGGACG
GGGACGAGCG GTAAACCTGG TGCCTGGGTT ATGGCACTTT CCCCGGATGA AAAAACATTG
TTGATACCCG GTATGGTCAG AGGTGACATT GTACGCATCA ATACCATCAC GCATCAGAAA
GAAGACTTTC CCGCAGGTGA TGCGCGTGGA ACGATATCGG CGATGCGTTT TCGACCTGAA
AACGGGGATG TAATTTTTGC CGACAGCCTG GGGATTTCAC GTATAAGAGT TGGGGATCAG
CAAGCCAGCA TTATGACGCA ATGGTGTAGC AGGAGCGTTT ATTCCGTTGA GGGTATTAGC
CCGGACGGTC AGTATTTAGC GTTGGTGTCA TATGGCTTGC AAGGTTATGT CATCCTGCTC
AATATTAATG TCGGGCAGAT TGTTGGCGTT TATCCTGCCA GCTACGTTAA TCACCTTCGT
TTTTCGGCGG ATGGTAGAAA GATATTTGTT ATGGCGAAGA ACGGGTTAAT CCAAATGGAC
AGGACGCTCT CGCTTGATCC GCAGGCAGTT ATTCGTCATC CCCAATATGG CAATGTGGCT
TGTATCCCTG AACCGTAA
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| Protein sequence | MSASSVKPLN VQLPAITLIL FALCVGIFCY LAQWMSYEEV DQSALIHLGA NVASLSLSGE
PWRLLSSVFL HSSFSHLLMN MFALLVVGAV TERILGKWRL LIIWLFSGVF GGLISACYAL
RDSDQIVISV GASGAIMGIA GAAIATQLAS GTGTHHKNQR RVFPLLGMVA LTLLYGARQT
GIDNACHIGG LIAGGALGWL SARLSGQNRL VTEGGIIVAG SLLLTGAIWL AQQQMDESVL
QVRQSLREEF YPQEIEQERR QKKQQLAEER NALRETLSAP VSREQASGDL LAEIADIHDM
AISRDGNTLY AAIENTNSIV VFDLGQKKIL HTFTAPIAKE KSVKHCGGCK DQGVRSLTLS
PDETLLYATS FEANALSVIN VATGEIIQSI TTGAHPDSLI LSRDGTKAWV MNRTSNSVSA
IDLVTYQHVA DIPLEKYDGT GTSGKPGAWV MALSPDEKTL LIPGMVRGDI VRINTITHQK
EDFPAGDARG TISAMRFRPE NGDVIFADSL GISRIRVGDQ QASIMTQWCS RSVYSVEGIS
PDGQYLALVS YGLQGYVILL NINVGQIVGV YPASYVNHLR FSADGRKIFV MAKNGLIQMD
RTLSLDPQAV IRHPQYGNVA CIPEP
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