| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcolC_2979 |
|---|
| Symbol | nagA |
|---|
| ID | 6065340 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli ATCC 8739 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010468 |
|---|
| Strand | + |
|---|
| Start bp | 3253619 |
|---|
| End bp | 3254767 |
|---|
| Gene Length | 1149 bp |
|---|
| Protein Length | 382 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 641602389 |
|---|
| Product | N-acetylglucosamine-6-phosphate deacetylase |
|---|
| Protein accession | YP_001725931 |
|---|
| Protein GI | 170020977 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1820] N-acetylglucosamine-6-phosphate deacetylase |
|---|
| TIGRFAM ID | [TIGR00221] N-acetylglucosamine-6-phosphate deacetylase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.821862 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTATGCAT TAACCCAGGG CCGGATCTTT ACCGGCCACG AATTTCTTGA TGACCACGCG
GTTGTTATCG CTGATGGCCT GATTAAAAGC GTCTGTCCGG TAGCGGAACT GCCGCCAGAG
ATCGAACAAC GTTCACTGAA CGGGGCCATT CTCTCCCCCG GTTTTATCGA TGTGCAGTTA
AACGGCTGCG GCGGCGTACA GTTTAACGAC ACCGCTGAAG CGGTCAGCGT GGAAACGCTG
GAAATCATGC AGAAAGCCAA TGAGAAATCA GGCTGTACTA ACTATCTGCC GACGCTTATC
ACCACCAGCG ATGAGCTGAT GAAACAGGGC GTGCGCGTTA TGCGCGAGTA CCTGGCAAAA
CATCCGAATC AGGCGTTAGG TCTGCATCTG GAAGGTCCGT GGCTGAATCT GGTAAAAAAA
GGCACCCATA ATCCGAATTT TGTGCGTAAG CCTGATGCCG CGCTGGTCGA TTTCCTGTGT
AAGAACGCCG ACGTCATTAC TAAAGTGACC CTGGCACCGG AAATGGTTCC TGCAGAAGTC
ATCAGCAAAC TGGCAAATGC CGGGATTGTG GTTTCTGCCG GTCACTCCAA CGCGACGTTG
AAAGAAGCGA AAGCCGGTTT CCGCGCGGGG ATTACCTTTG CCACCCATCT GTACAACGCG
ATGCCGTATA TTACCGGTCG TGAACCGGGC CTGGCGGGCG CGATCCTCGA CGAAGCTGAC
ATTTATTGCG GTATTATCGC TGATGGCCTG CATGTTGATT ACGCCAACAT TCGTAACGCT
AAACGCCTGA AAGGCGACAA ACTGTGTCTG GTTACCGACG CCACCGCGCC AGCAGGTGCC
AACATTGAAC AGTTCATTTT TGCGGGTAAA ACAATATACT ACCGTAACGG ACTTTGTGTG
GATGAGAACG GTACGTTAAG CGGTTCATCC TTAACCATGA TTGAAGGCGT GCGTAATCTG
GTCGAACATT GCGGTATCGC ACTGGATGAA GTGCTGCGTA TGGCGACGCT CTATCCGGCG
CGTGCGATTG GCGTTGAGAA ACGTCTCGGC ACACTCGCCG CAGGTAAAGT AGCCAACCTG
ACCGCATTCA CACCTGATTT TAAAATCACC AAGACCATCG TTAACGGTAA CGAGGTCGTA
ACTCAATAA
|
|---|
| Protein sequence | MYALTQGRIF TGHEFLDDHA VVIADGLIKS VCPVAELPPE IEQRSLNGAI LSPGFIDVQL
NGCGGVQFND TAEAVSVETL EIMQKANEKS GCTNYLPTLI TTSDELMKQG VRVMREYLAK
HPNQALGLHL EGPWLNLVKK GTHNPNFVRK PDAALVDFLC KNADVITKVT LAPEMVPAEV
ISKLANAGIV VSAGHSNATL KEAKAGFRAG ITFATHLYNA MPYITGREPG LAGAILDEAD
IYCGIIADGL HVDYANIRNA KRLKGDKLCL VTDATAPAGA NIEQFIFAGK TIYYRNGLCV
DENGTLSGSS LTMIEGVRNL VEHCGIALDE VLRMATLYPA RAIGVEKRLG TLAAGKVANL
TAFTPDFKIT KTIVNGNEVV TQ
|
|---|
| |