| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcolC_2961 |
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| Symbol | |
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| ID | 6065697 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli ATCC 8739 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010468 |
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| Strand | + |
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| Start bp | 3231887 |
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| End bp | 3234574 |
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| Gene Length | 2688 bp |
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| Protein Length | 895 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 641602372 |
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| Product | sensor protein KdpD |
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| Protein accession | YP_001725914 |
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| Protein GI | 170020960 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2205] Osmosensitive K+ channel histidine kinase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.647759 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATAACG AACCCTTACG TCCCGACCCC GATCGTCTGC TGGAACAAAC TGCCGCGCCG
CATCGGGGGA AGCTGAAAGT TTTCTTCGGT GCCTGTGCAG GCGTCGGGAA GACCTGGGCG
ATGCTGGCAG AAGCCCAGCG ACTGCGGGCG CAAGGGCTGG ATATTGTGGT TGGCGTGGTA
GAAACCCACG GGCGAAAAGA TACCGCCGCC ATGCTGGAAG GGCTGGCTGT TCTGCCGTTA
AAACGCCAGG CGTACCGTGG GCGGCATATC AGCGAGTTTG ATCTCGATGC CGCCCTCGCC
CGCCGCCCGG CGCTGATCTT AATGGACGAA CTGGCGCACA GTAATGCGCC AGGTTCCCGT
CATCCCAAAC GCTGGCAGGA TATCGAAGAA CTGCTGGAAG CTGGCATTGA TGTTTTCACT
ACCGTCAACG TTCAGCATCT GGAAAGTCTG AATGATGTGG TCAGCGGCGT CACCGGAATT
CAGGTACGGG AAACCGTGCC CGATCCTTTT TTCGATGCCG CCGACGACGT GGTGCTGGTG
GACTTGCCCC CGGACGATCT GCGCCAGCGG CTGAAAGAAG GCAAAGTCTA TATTGCCGGG
CAGGCGGAGC GCGCCATTGA ACATTTTTTC CGCAAAGGTA ATCTGATCGC CCTGCGCGAA
CTGGCACTGC GCCGTACTGC CGATCGCGTT GATGAGCAAA TGCGCGCCTG GCGGGGGCAT
CCTGGCGAAG AGAAAGTGTG GCACACGCGC GACGCGATCC TTTTATGCAT CGGCCATAAC
ACCGGCAGCG AAAAACTGGT CCGCGCAGCG GCGCGGCTGG CGTCACGGCT GGGTAGCGTC
TGGCACGCGG TGTATGTTGA AACCCCTGCC CTGCACCGCT TACCGGAAAA AAAACGTCGG
GCAATTCTCA GCGCCTTACG TCTGGCGCAG GAACTGGGCG CGGAGACGGC AACACTTTCT
GATCCAGCGG AAGAGAAAGC GGTAGTGCGT TATGCCCGTG AACATAATCT CGGCAAGATT
ATTCTCGGTC GCCCGGCCTC GCGCCGCTGG TGGCGTCGGG AAACGTTTGC TGACCGACTG
GCGCGCATCG CCCCCGATCT CGATCAGGTG CTGGTCGCGC TTGATGAACC ACCCGCCCGC
ACGATTAACA ACGCGCCGGA TAACCGCTCT TTTAAAGACA AGTGGCGTGT ACAAATTCAG
GGATGCGTGG TTGCCGCCGC GTTATGCGCC GTTATCACCT TAATTGCCAT GCAGTGGCTG
ATGGCGTTTG ATGCCGCCAA CCTGGTGATG CTGTATCTGC TTGGCGTGGT GGTGGTGGCG
CTATTTTATG GACGCTGGCC TTCAGTGGTT GCCACCGTCA TTAATGTAGT GAGTTTCGAT
CTCTTTTTTA TCGCCCCACG CGGCACGCTC GCCGTCTCTG ATGTGCAATA TCTGCTGACC
TTCGCGGTGA TGTTAACCGT CGGGCTGGTG ATCGGGAACC TTACTGCTGG CGTGCGTTAT
CAGGCGCGGG TAGCCCGTTA CCGCGAGCAA CGCACACGGC ACTTATATGA AATGTCGAAA
GCTCTGGCGG TGGGCCGCAG TCCGCAGGAT ATCGCTGCCA CCAGCGAACA ATTTATTGCC
TCCACGTTTC ATGCCCGCAG TCAGGTGTTG TTGCCCGATG ACAACGGTAA ATTGCAGCCG
TTAACACATC CGCAAGGAAT GACGCCGTGG GACGATGCCA TCGCGCAGTG GAGTTTTGAT
AAAGGCCTGC CTGCGGGCGC GGGCACCGAC ACGTTACCCG GTGTACCGTA CCAGATTTTG
CCGCTAAAAA GCGGCGAGAA AACCTACGGG CTGGTGGTGG TGGAGCCGGG GAATCTGCGC
CAGTTGATGA TCCCGGAACA GCAGCGCCTG CTGGAGACGT TTACGCTGTT AGTCGCCAAT
GCCCTTGAGC GGCTGACGCT AACCGCCAGC GAAGAACAGG CGCGGATGGC AAGCGAACGT
GAACAGATCC GCAACGCCCT GCTGGCGGCG CTTTCGCATG ATTTACGCAC GCCGCTTACG
GTGCTGTTTG GTCAGGCAGA AATCTTAACG CTCGATCTGG CAAGCGAAGG ATCACCCCAC
GCCCGCCAGG CCAGCGAGAT CCGTCAGCAC GTGCTGAACA CTACCCGACT GGTGAATAAT
CTACTGGATA TGGCGCGAAT TCAGTCCGGC GGCTTTAATT TGAAGAAAGA GTGGTTAACG
CTGGAAGAAG TAGTCGGCAG CGCGCTGCAA ATGCTGGAAC CGGGTTTATC GTCGCCCATC
AATCTTTCTC TGCCAGAACC GCTGACCTTA ATCCACGTTG ACGGGCCACT CTTTGAACGG
GTGCTGATTA ATCTGCTGGA GAACGCGGTG AAATATGCGG GTGCGCAGGC CGAAATTGGT
ATCGATGCCC ACGTTGAGGG CGAAAATCTA CAACTGGATG TCTGGGATAA CAACGGCCCC
GGTCTTCCGC CAGGCCAGGA GCAGACGATA TTTGATAAGT TTGCTCGCGG GAATAAAGAG
TCGGCAGTAC CGGGGGTAGG GCTTGGACTG GCAATTTGTC GGGCGATAGT GGATGTACAC
GGGGGCACTA TTACCGCGTT CAACCGACCG GAAGGTGGTG CCTGTTTTCG TGTTACACTT
CCCCAGCAAA CTGCCCCTGA ACTTGAAGAA TTTCATGAGG ATATGTGA
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| Protein sequence | MNNEPLRPDP DRLLEQTAAP HRGKLKVFFG ACAGVGKTWA MLAEAQRLRA QGLDIVVGVV
ETHGRKDTAA MLEGLAVLPL KRQAYRGRHI SEFDLDAALA RRPALILMDE LAHSNAPGSR
HPKRWQDIEE LLEAGIDVFT TVNVQHLESL NDVVSGVTGI QVRETVPDPF FDAADDVVLV
DLPPDDLRQR LKEGKVYIAG QAERAIEHFF RKGNLIALRE LALRRTADRV DEQMRAWRGH
PGEEKVWHTR DAILLCIGHN TGSEKLVRAA ARLASRLGSV WHAVYVETPA LHRLPEKKRR
AILSALRLAQ ELGAETATLS DPAEEKAVVR YAREHNLGKI ILGRPASRRW WRRETFADRL
ARIAPDLDQV LVALDEPPAR TINNAPDNRS FKDKWRVQIQ GCVVAAALCA VITLIAMQWL
MAFDAANLVM LYLLGVVVVA LFYGRWPSVV ATVINVVSFD LFFIAPRGTL AVSDVQYLLT
FAVMLTVGLV IGNLTAGVRY QARVARYREQ RTRHLYEMSK ALAVGRSPQD IAATSEQFIA
STFHARSQVL LPDDNGKLQP LTHPQGMTPW DDAIAQWSFD KGLPAGAGTD TLPGVPYQIL
PLKSGEKTYG LVVVEPGNLR QLMIPEQQRL LETFTLLVAN ALERLTLTAS EEQARMASER
EQIRNALLAA LSHDLRTPLT VLFGQAEILT LDLASEGSPH ARQASEIRQH VLNTTRLVNN
LLDMARIQSG GFNLKKEWLT LEEVVGSALQ MLEPGLSSPI NLSLPEPLTL IHVDGPLFER
VLINLLENAV KYAGAQAEIG IDAHVEGENL QLDVWDNNGP GLPPGQEQTI FDKFARGNKE
SAVPGVGLGL AICRAIVDVH GGTITAFNRP EGGACFRVTL PQQTAPELEE FHEDM
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