Gene EcolC_2948 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_2948 
Symbol 
ID6065627 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp3215607 
End bp3216116 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content50% 
IMG OID641602360 
Producthypothetical protein 
Protein accessionYP_001725902 
Protein GI170020948 
COG category[S] Function unknown 
COG ID[COG3272] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0572605 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCAGC AACGATTTGA TGACAGCACC CTAATCCGTA TCTTCGCCCT TCATGAGTTA 
CATCGACTGA AAGAACATGG CTTAACGCGC GGGGCGCTTC TCGATTATCA CAGCCGCTAT
AAACTCGTCT TTCTGGCGCA TTCTCAGCCG GAGTACCGCA AACTTGGCCC GTTCGTGGCT
GATATTCACC AGTGGCAAAA TCTGGATGAT TTTTACAACC AGTACTACCA ACGCGTAATT
GTTTTGCTTT CTCATCCCGC CAACCCGCGC GATCACACCA ACGTTTTGAT GCACGTTCAG
GGTTATTTTC GCCCGCATAT TGATTCCACA GAACGCCAGC AGTTGGCGGC GCTTATCGAC
AGTTATCGCC GTGGCGAGCA ACCACTTCTT GCGCCGCTGA TGCGTATCAA ACACTATATG
GCGCTTTATC CTGACGCCTG GCTTTCAGGG CAGCGTTATT TCGAACTTTG GCCGCGTGTG
ATTAACTTGC GCCATTCAGG AGTTTTATGA
 
Protein sequence
MNQQRFDDST LIRIFALHEL HRLKEHGLTR GALLDYHSRY KLVFLAHSQP EYRKLGPFVA 
DIHQWQNLDD FYNQYYQRVI VLLSHPANPR DHTNVLMHVQ GYFRPHIDST ERQQLAALID
SYRRGEQPLL APLMRIKHYM ALYPDAWLSG QRYFELWPRV INLRHSGVL