Gene EcolC_2936 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_2936 
Symbol 
ID6065546 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp3202424 
End bp3202990 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content48% 
IMG OID641602348 
Productfimbrial protein 
Protein accessionYP_001725890 
Protein GI170020936 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3539] P pilus assembly protein, pilin FimA 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.545876 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTAAAG GACAAAAAAC ATTGGCCGCA CTGGCCGTAT CTCTGCTGTT CACAGCACCT 
GTTTATGCGG CTGATGAAGG ATCCGGTGAA ATTCACTTTA AAGGTGAAGT TATTGAAGCA
CCGTGTGAAA TACATCAGGA TGATATTGAT AAAGAGGTTG AACTCGGTCA GGTGACCACC
AGCCACATTA ATCAGTCACA TCACAGCGAT GCCGTTGCTG TCGACCTGCG CTTAGTCAAC
TGTGATCTGG AAAACTCCAG CAACGGTTCC GGTGGCAAGA TTTCTAAAGT TGCAGTCACC
TTTGATAGCT CAGCGAAAAC CACCGGCGCA GATCCGATTC TCAACAACAC CAGCACGGGT
GAAGCCACCG GCGTCGGCGT ACGTTTAATG AATAAAGATC AAAGCAATAT CGTTTTAGGC
ACCGCTACTC CAGATATCGA CCTGGCTCCG ACCTCCAGCG AACAAACGCT GAATTTCTTT
GCCTGGATGG AACAAATTGA TCAGGCTACA CCTGTAACGC CAGGCGCAGT TACGGCGAAT
GCAACCTACG TGCTGGATTA TAAATAA
 
Protein sequence
MFKGQKTLAA LAVSLLFTAP VYAADEGSGE IHFKGEVIEA PCEIHQDDID KEVELGQVTT 
SHINQSHHSD AVAVDLRLVN CDLENSSNGS GGKISKVAVT FDSSAKTTGA DPILNNTSTG
EATGVGVRLM NKDQSNIVLG TATPDIDLAP TSSEQTLNFF AWMEQIDQAT PVTPGAVTAN
ATYVLDYK