| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcolC_2934 |
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| Symbol | sdhC |
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| ID | 6065538 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli ATCC 8739 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010468 |
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| Strand | - |
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| Start bp | 3199654 |
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| End bp | 3200058 |
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| Gene Length | 405 bp |
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| Protein Length | 134 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641602346 |
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| Product | succinate dehydrogenase cytochrome b556 large membrane subunit |
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| Protein accession | YP_001725888 |
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| Protein GI | 170020934 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2009] Succinate dehydrogenase/fumarate reductase, cytochrome b subunit |
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| TIGRFAM ID | [TIGR02970] succinate dehydrogenase, cytochrome b556 subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.107095 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTGGGCGT TATTCATGAT AAGAAATGTG AAAAAACAAA GACCTGTTAA TCTGGACCTA
CAGACCATCC GGTTCCCCAT CACGGCGATA GCGTCCATTC TCCATCGCGT TTCCGGTGTG
ATCACCTTTG TTGCAGTGGG CATCCTGCTG TGGCTTCTGG GTACCAGCCT CTCTTCCCCT
GAAGGTTTCG AGCAAGCTTC CGCGATTATG GGCAGCTTCT TCGTCAAATT TATCATGTGG
GGCATCCTTA CCGCTCTGGC GTATCACGTC GTCGTAGGTA TTCGCCACAT GATGATGGAT
TTTGGCTATC TGGAAGAAAC ATTCGAAGCG GGTAAACGCT CCGCCAAAAT CTCCTTTGTT
ATTACTGTCG TGCTTTCACT TCTCGCAGGA GTCCTCGTAT GGTAA
|
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| Protein sequence | MWALFMIRNV KKQRPVNLDL QTIRFPITAI ASILHRVSGV ITFVAVGILL WLLGTSLSSP
EGFEQASAIM GSFFVKFIMW GILTALAYHV VVGIRHMMMD FGYLEETFEA GKRSAKISFV
ITVVLSLLAG VLVW
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