Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcolC_2931 |
Symbol | sdhB |
ID | 6065532 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli ATCC 8739 |
Kingdom | Bacteria |
Replicon accession | NC_010468 |
Strand | - |
Start bp | 3196815 |
End bp | 3197531 |
Gene Length | 717 bp |
Protein Length | 238 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 641602343 |
Product | succinate dehydrogenase iron-sulfur subunit |
Protein accession | YP_001725885 |
Protein GI | 170020931 |
COG category | [C] Energy production and conversion |
COG ID | [COG0479] Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit |
TIGRFAM ID | [TIGR00384] succinate dehydrogenase and fumarate reductase iron-sulfur protein |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.377039 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGACTCG AGTTTTCAAT TTATCGCTAT AACCCGGATG TTGATGATGC TCCGCGTATG CAGGATTACA CCCTGGAAGC GGAAGAAGGT CGCGACATGA TGTTGCTGGA TGCGCTTATC CAGCTGAAAG AGAAAGATCC CAGCCTGTCG TTCCGCCGCT CCTGCCGTGA AGGTGTGTGC GGTTCCGACG GTCTGAACAT GAACGGCAAG AATGGTCTGG CCTGTATTAC CCCGATTTCG GCACTCAACC AGCCGGGCAA GAAGATTGTG ATTCGCCCGC TGCCAGGTTT ACCGGTGATC CGCGATTTGG TGGTAGACAT GGGACAATTC TATGCGCAAT ATGAGAAAAT TAAGCCTTAC CTGTTGAATA ATGGACAAAA TCCGCCAGCT CGCGAGCATT TACAGATGCC AGAGCAGCGC GAAAAACTCG ACGGGCTGTA TGAATGTATT CTCTGCGCAT GTTGTTCAAC CTCTTGTCCG TCTTTCTGGT GGAATCCCGA TAAGTTTATC GGCCCGGCAG GCTTGTTAGC GGCATATCGT TTCCTGATCG ATAGCCGTGA TACCGAGACT GACAGCCGCC TCGACGGTTT GAGCGATGCA TTCAGTGTAT TCCGCTGTCA CAGCATCATG AACTGCGTCA GTGTATGTCC GAAGGGGCTG AACCCGACGC GCGCCATCGG CCATATCAAG TCGATGTTGT TGCAACGTAA TGCGTAA
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Protein sequence | MRLEFSIYRY NPDVDDAPRM QDYTLEAEEG RDMMLLDALI QLKEKDPSLS FRRSCREGVC GSDGLNMNGK NGLACITPIS ALNQPGKKIV IRPLPGLPVI RDLVVDMGQF YAQYEKIKPY LLNNGQNPPA REHLQMPEQR EKLDGLYECI LCACCSTSCP SFWWNPDKFI GPAGLLAAYR FLIDSRDTET DSRLDGLSDA FSVFRCHSIM NCVSVCPKGL NPTRAIGHIK SMLLQRNA
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