| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcolC_2919 |
|---|
| Symbol | |
|---|
| ID | 6065496 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli ATCC 8739 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010468 |
|---|
| Strand | - |
|---|
| Start bp | 3180164 |
|---|
| End bp | 3180568 |
|---|
| Gene Length | 405 bp |
|---|
| Protein Length | 134 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 641602331 |
|---|
| Product | acyl-CoA thioester hydrolase YbgC |
|---|
| Protein accession | YP_001725873 |
|---|
| Protein GI | 170020919 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0824] Predicted thioesterase |
|---|
| TIGRFAM ID | [TIGR00051] acyl-CoA thioester hydrolase, YbgC/YbaW family
[TIGR02799] tol-pal system-associated acyl-CoA thioesterase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.000323269 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAATACAA CGCTGTTTCG ATGGCCGGTT CGCGTCTACT ATGAAGATAC CGATGCCGGT
GGTGTGGTGT ACCACGCCAG TTACGTCGCT TTTTATGAAA GAGCACGCAC AGAGATGCTG
CGTCATCATC ACTTCAGTCA GCAGGCGCTG ATGGCTGAAC GCGTTGCCTT TGTGGTACGT
AAAATGACGG TGGAATATTA CGCACCTGCG CGGCTCGACG ATATGCTCGA AATACAGACT
GAAATAACAT CAATGCGTGG CACCTCTTTG GTTTTCACGC AACGTATTGT CAACGCCGAG
AATACTTTGC TGAATGAAGC AGAGGTTCTG GTTGTTTGCG TTGACCCACT CAAAATGAAG
CCTCGTGCGC TTCCCAAGTC TATTGTCGCG GAGTTTAAGC AGTGA
|
|---|
| Protein sequence | MNTTLFRWPV RVYYEDTDAG GVVYHASYVA FYERARTEML RHHHFSQQAL MAERVAFVVR
KMTVEYYAPA RLDDMLEIQT EITSMRGTSL VFTQRIVNAE NTLLNEAEVL VVCVDPLKMK
PRALPKSIVA EFKQ
|
|---|
| |