| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcolC_2914 |
|---|
| Symbol | |
|---|
| ID | 6065471 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli ATCC 8739 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010468 |
|---|
| Strand | - |
|---|
| Start bp | 3175726 |
|---|
| End bp | 3176247 |
|---|
| Gene Length | 522 bp |
|---|
| Protein Length | 173 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 641602326 |
|---|
| Product | peptidoglycan-associated outer membrane lipoprotein |
|---|
| Protein accession | YP_001725868 |
|---|
| Protein GI | 170020914 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
|---|
| TIGRFAM ID | [TIGR02802] peptidoglycan-associated lipoprotein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.0000000121586 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.464909 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAACTGA ACAAAGTGCT GAAAGGGCTG ATGATTGCTC TGCCTGTTAT GGCAATTGCG
GCATGTTCTT CCAACAAGAA CGCCAGCAAT GACGGCAGCG AAGGCATGCT GGGTGCCGGC
ACTGGTATGG ATGCGAACGG CGGCAACGGC AACATGTCTT CCGAAGAGCA GGCTCGTCTG
CAAATGCAAC AGCTGCAGCA GAACAACATC GTTTACTTCG ATCTGGACAA GTACGATATC
CGTTCTGACT TCGCTCAAAT GCTGGATGCA CATGCAAACT TCCTGCGTAG CAACCCGTCT
TACAAAGTCA CCGTAGAAGG TCACGCGGAC GAACGTGGTA CTCCGGAATA CAACATCTCC
CTGGGTGAAC GTCGTGCGAA CGCCGTTAAG ATGTACCTGC AGGGTAAAGG CGTTTCTGCA
GACCAGATCT CCATCGTTTC TTACGGTAAA GAAAAACCTG CAGTACTGGG TCATGACGAA
GCGGCATACT CCAAAAACCG TCGTGCGGTA CTGGTTTACT AA
|
|---|
| Protein sequence | MQLNKVLKGL MIALPVMAIA ACSSNKNASN DGSEGMLGAG TGMDANGGNG NMSSEEQARL
QMQQLQQNNI VYFDLDKYDI RSDFAQMLDA HANFLRSNPS YKVTVEGHAD ERGTPEYNIS
LGERRANAVK MYLQGKGVSA DQISIVSYGK EKPAVLGHDE AAYSKNRRAV LVY
|
|---|
| |