Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcolC_2890 |
Symbol | |
ID | 6065080 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli ATCC 8739 |
Kingdom | Bacteria |
Replicon accession | NC_010468 |
Strand | + |
Start bp | 3148286 |
End bp | 3149569 |
Gene Length | 1284 bp |
Protein Length | 427 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 641602295 |
Product | putative pectinesterase |
Protein accession | YP_001725844 |
Protein GI | 170020890 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG4677] Pectin methylesterase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0446001 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.0752938 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAACACAT TTTCAGTTTC CCGTCTGGCG CTGGCATTGG CTTTTGGCGT GACGCTGACC GCCTGTAGCT CAACCCCGCC CGATCAACGT CCTTCTGATC AAACCGCGCC TGGTACCTCT TCTCGCCCGA TTCTGTCGGC AAAAGAAGCG CAGAATTTCG ATGCTCAACA CTATTTTGCA TCCCTGACAC CAGGTGCTGC AGCGTGGAAT CCTTCCCCGA TTACCCTGCC TGCGCAACCT GAATTTGTTG TCGGCCCGGC GGGCACTCAA GGTGTAACGC ATACCACGAT TCAGGCGGCG GTAGATGCGG CAATTATCAA GCGTACCAAC AAGCGCCAGT ATATTGCCGT GATGCCTGGT GAGTATCAGG GAACGGTATA TGTCCCTGCC GCTCCGGGTG GAATTACTCT GTACGGTACA GGTGAAAAAC CGATTGATGT GAAGATTGGG CTTTCCCTTG ATGGTGGCAT GAGCCCTGCC GACTGGCGTC ACGACGTCAA CCCGCGCGGC AAATATATGC CAGGTAAACC AGCGTGGTAT ATGTACGATA GCTGCCAGAG CAAACGCAGC GACAGTATCG GTGTTCTCTG CTCTGCGGTC TTCTGGTCAC AAAACAATGG CCTGCAACTG CAAAATCTGA CCATCGAAAA CACGCTGGGC GATAGCGTAG ATGCAGGTAA CCATCCGGCG GTGGCACTGC GTACTGATGG TGACCAGGTA CAGATTAACA ACGTTAACAT TCTCGGTCGT CAGAACACCT TCTTTGTCAC CAACAGCGGT GTGCAGAACC GTCTGGAAAC GAATCGTCAG CCGCGTACGC TGGTGACCAA CAGCTACATT GAAGGGGATG TGGATATCGT TTCTGGTCGC GGCGCAGTGG TGTTCGATAA CACCGAATTC CGCGTGGTGA ACTCACGTAC TCAGCAAGAA GCGTATGTGT TTGCACCGGC TACGCTGTCC AACATTTACT ACGGTTTCCT CGCCGTAAAC AGCCGTTTCA ATGCTTTCGG TGATGGTGTG GCGCAACTGG GCCGCTCGCT GGATGTTGAT GCCAATACCA ACGGTCAGGT GGTGATCCGT GATAGCGCCA TCAACGAAGG TTTTAACACG GCTAAACCGT GGGCCGATGC GGTGATCTCT AATCGTCCGT TTGCGGGTAA TACCGGCAGC GTAGATGATA ACGACGAAAT ACAGCGCAAT CTGAATGACA CTAACTACAA CCGCATGTGG GAATACAATA ACCGCGGCGT GGGTAGTAAA GTGGTTGCAG AGGCGAAGAA GTAA
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Protein sequence | MNTFSVSRLA LALAFGVTLT ACSSTPPDQR PSDQTAPGTS SRPILSAKEA QNFDAQHYFA SLTPGAAAWN PSPITLPAQP EFVVGPAGTQ GVTHTTIQAA VDAAIIKRTN KRQYIAVMPG EYQGTVYVPA APGGITLYGT GEKPIDVKIG LSLDGGMSPA DWRHDVNPRG KYMPGKPAWY MYDSCQSKRS DSIGVLCSAV FWSQNNGLQL QNLTIENTLG DSVDAGNHPA VALRTDGDQV QINNVNILGR QNTFFVTNSG VQNRLETNRQ PRTLVTNSYI EGDVDIVSGR GAVVFDNTEF RVVNSRTQQE AYVFAPATLS NIYYGFLAVN SRFNAFGDGV AQLGRSLDVD ANTNGQVVIR DSAINEGFNT AKPWADAVIS NRPFAGNTGS VDDNDEIQRN LNDTNYNRMW EYNNRGVGSK VVAEAKK
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