Gene EcolC_2857 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_2857 
Symbol 
ID6065207 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp3125812 
End bp3126516 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content49% 
IMG OID641602263 
Producthypothetical protein 
Protein accessionYP_001725812 
Protein GI170020858 
COG category[R] General function prediction only 
COG ID[COG0670] Integral membrane protein, interacts with FtsH 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00496163 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGACAGAT TCCCACGTTC TGATTCAATC GTACAACCCC GGGCTGGCTT GCAAACTTAT 
ATGGCTCAAG TCTATGGCTG GATGACCGTT GGCTTGTTGC TGACCGCATT TGTTGCCTGG
TATGCGGCTA ATTCCGCGGC CGTGATGGAG CTGTTGTTCA CTAACCGTGT CTTTTTAATC
GGTCTGATCA TCGCGCAATT AGCATTGGTT ATTGTGTTAT CAGCGATGAT TCAAAAGCTG
AGCGCAGGTG TAACGACGAT GCTCTTTATG CTTTATTCGG CGCTGACGGG TCTTACGCTT
TCCAGTATAT TCATTGTCTA TACCGCTGCT TCTATCGCCA GTACTTTCGT CGTTACTGCC
GGGATGTTCG GCGCAATGAG CCTGTACGGT TACACCACGA AGCGCGATTT AAGTGGCTTT
GGCAATATGC TGTTTATGGC GTTAATCGGC ATTGTGCTGG CATCGCTGGT CAACTTCTGG
TTGAAAAGCG AAGCATTGAT GTGGGCAGTT ACCTACATCG GCGTGATTGT CTTTGTCGGA
TTGACGGCGT ATGACACGCA GAAACTGAAA AATATGGGTG AGCAGATTGA TACCCGCGAC
ACGTCGAACC TGCGCAAATA TTCCATTCTT GGCGCGTTAA CCTTGTATCT GGACTTCATC
AACCTGTTCC TGATGTTGTT GCGGATCTTC GGCAACCGCC GTTAA
 
Protein sequence
MDRFPRSDSI VQPRAGLQTY MAQVYGWMTV GLLLTAFVAW YAANSAAVME LLFTNRVFLI 
GLIIAQLALV IVLSAMIQKL SAGVTTMLFM LYSALTGLTL SSIFIVYTAA SIASTFVVTA
GMFGAMSLYG YTTKRDLSGF GNMLFMALIG IVLASLVNFW LKSEALMWAV TYIGVIVFVG
LTAYDTQKLK NMGEQIDTRD TSNLRKYSIL GALTLYLDFI NLFLMLLRIF GNRR