Gene EcolC_2851 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_2851 
Symbol 
ID6065176 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp3120292 
End bp3121398 
Gene Length1107 bp 
Protein Length368 aa 
Translation table11 
GC content52% 
IMG OID641602257 
ProductABC-2 type transporter 
Protein accessionYP_001725806 
Protein GI170020852 
COG category[V] Defense mechanisms 
COG ID[COG0842] ABC-type multidrug transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00579888 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTTTCATC GCTTATGGAC GTTAATCCGC AAAGAGTTGC AGTCGTTGCT GCGCGAACCG 
CAAACCCGCG CGATTCTGAT TTTACCCGTG CTAATTCAGG TGATCCTGTT CCCGTTCGCC
GCCACGCTGG AAGTGACTAA CGCCACCATC GCCATCTACG ATGAAGATAA CGGCGAGCAT
TCGGTGGAGC TGACCCAACG TTTTGCCCGC GCCAGCGCCT TTACTCATGT GCTGCTGCTG
AAAAGCCCAC AGGAGATCCG CCCAACCATC GACACACAAA AGGCGTTACT ACTGGTGCGT
TTCCCGGCTG ACTTCTCGCG CAAACTGGAT ACCTTCCAGA CCGCGCCTTT GCAGTTGATC
CTCGACGGGC GTAACTCCAA CAGTGCGCAA ATTGCCGCCA ACTACCTGCA ACAGATCGTC
AAAAATTATC AGCAGGAGCT GCTGGAAGGA AAACCGAAAC CTAACAACAG CGAGCTGGTG
GTACGCAACT GGTATAACCC GAATCTCGAC TACAAATGGT TTGTGGTGCC GTCACTGATC
GCCATGATCA CCACTATCGG CGTAATGATC GTCACTTCAC TTTCCGTCGC CCGCGAACGT
GAACAAGGTA CGCTCGATCA GCTACTGGTT TCGCCGCTCA CCACCTGGCA GATCTTCATC
GGCAAAGCCG TACCGGCGTT AATTGTCGCC ACCTTCCAGG CCACCATTGT GCTGGCGATT
GGTATCTGGG CGTATCAAAT CCCCTTCGCC GGATCGCTGG CGCTGTTCTA CTTTACGATG
GTGATTTATG GTTTATCGCT GGTGGGATTC GGTCTGTTGA TTTCATCACT CTGTTCAACA
CAACAGCAGG CGTTTATCGG CGTGTTTGTC TTTATGATGC CCGCCATTCT CCTTTCCGGT
TACGTTTCTC CGGTGGAAAA CATGCCGGTA TGGCTGCAAA ACCTGACGTG GATTAACCCT
ATTCGCCACT TTACGGACAT TACCAAGCAG ATTTATTTGA AGGATGCGAG TCTGGATATT
GTGTGGAATA GTTTGTGGCC GCTACTGGTG ATAACGGCCA CGACAGGGTC AGCGGCGTAC
GCGATGTTTA GACGTAAGGT GATGTAA
 
Protein sequence
MFHRLWTLIR KELQSLLREP QTRAILILPV LIQVILFPFA ATLEVTNATI AIYDEDNGEH 
SVELTQRFAR ASAFTHVLLL KSPQEIRPTI DTQKALLLVR FPADFSRKLD TFQTAPLQLI
LDGRNSNSAQ IAANYLQQIV KNYQQELLEG KPKPNNSELV VRNWYNPNLD YKWFVVPSLI
AMITTIGVMI VTSLSVARER EQGTLDQLLV SPLTTWQIFI GKAVPALIVA TFQATIVLAI
GIWAYQIPFA GSLALFYFTM VIYGLSLVGF GLLISSLCST QQQAFIGVFV FMMPAILLSG
YVSPVENMPV WLQNLTWINP IRHFTDITKQ IYLKDASLDI VWNSLWPLLV ITATTGSAAY
AMFRRKVM