Gene EcolC_2835 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_2835 
Symbol 
ID6065118 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp3100920 
End bp3103145 
Gene Length2226 bp 
Protein Length741 aa 
Translation table11 
GC content53% 
IMG OID641602241 
Producthypothetical protein 
Protein accessionYP_001725790 
Protein GI170020836 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0668] Small-conductance mechanosensitive channel 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.49236 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.59414 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGTGGA TCCTGTTCAT CCTCTTCTGC CTGCTGGGCG CACCTGCCCA CGCGGTATCC 
ATACCCGGCG TTACAACCAC AACGACAACG GACTCAACGA CTGAACCGGC CCCGGAACCG
GATATCGAAC AAAAAAAAGC GGCCTATGGC GCACTGGCGG ATGTGCTGGA TAATGACACC
TCGCGTAAAG AGTTGATCGA CCAGTTGCGC ACCGTTGCCG CTACGCCCCC TGCTGAACCG
GTACCAAAAA TAGTGCCGCC GACGCTGGTC GAAGAGCAAA CCGTGCTGCA AAAGGTCACC
GAAGTCAGCC GCCATTATGG TGAAGCCCTT TCCGCCCGCT TCGGGCAACT TTATCGCAAT
ATCACCGGCT CCCCGCATAA GCCGTTTAAT CCACAAACCT TCAGCAATGC GCTGACCCAT
TTTTCAATGT TAGCGGTATT AGTGTTTGGT TTTTACTGGC TGATTCGCCT GTGCGCACTG
CCGCTGTATC GCAAAATGGG TCAGTGGGCG CGGCAAAAAA ATCGTGAGCG CAGCAACTGG
TTGCAGCTTC CGGCGATGAT TATCGGGGCG TTTATTATCG ACCTGCTGTT ACTGGCCCTG
ACATTATTTG TCGGCCAGGT ATTAAGCGAC AACCTGAATG CAGGCAGTCG CACCATCGCT
TTCCAACAAA GTTTGTTTCT CAACGCCTTT GCCCTCATTG AATTTTTCAA AGCCGTACTA
CGCCTGATTT TTTGCCCAAA CGTGGCGGAG CTGCGCCCGT TCACGATTCA GGACGAGAGC
GCCCGTTACT GGAGTCGTCG CCTGAGCTGG TTAAGCAGTT TGATAGGTTA TGGCCTGATT
GTGGCCGTGC CGATTATCTC TAATCAGGTG AATGTACAGA TAGGTGCGCT GGCGAACGTC
ATCATTATGC TGTGCATGAC CGTCTGGGCG TTGTACCTGA TCTTTCGTAA TAAAAAAGAG
ATTACCCAGC ATTTGCTCAA CTTCGCGGAG CATTCGCTGG CCTTTTTCAG CCTGTTTATC
CGCGCCTTTG CGCTGGTGTG GCACTGGCTG GCAAGCGCCT ATTTTATCGT GCTGTTTTTC
TTTTCGTTGT TCGATCCGGG CAACAGCCTG AAATTTATGA TGGGTGCAAC GGTGCGCAGC
CTGGCGATTA TTGGTATCGC AGCGTTTGTT TCCGGTATGT TTTCCCGCTG GCTGGCGAAA
ACCATCACTC TCTCGCCACA TACTCAGCGT AACTATCCGG AGCTGCAAAA ACGGTTGAAT
GGCTGGCTGT CGGCGGCGCT GAAAACGGCG CGTATTCTGA CAGTCTGCGT GGCGGTAATG
TTGCTGTTGA GCGCATGGGG ATTGTTCGAT TTCTGGAACT GGCTGCAAAA CGGCGCGGGG
CAGAAAACCG TAGATATCCT GATCCGTATC GCACTCATTC TTTTCTTCTC GGCGGTTGGC
TGGACGGTGC TCGCCAGTTT GATCGAAAAC CGGCTGGCTT CGGATATTCA TGGCCGCCCG
CTACCCAGCG CCCGCACGCG TACCCTGCTT ACGCTGTTTC GTAACGCGCT GGCGGTGATT
ATCAGTACCA TCACCATCAT GATTGTGTTG TCGGAAATCG GCGTCAATAT CGCGCCATTG
CTGGCAGGTG CCGGGGCATT AGGTCTGGCT ATCTCGTTTG GTTCGCAAAC GCTGGTGAAA
GATATTATCA CCGGGGTATT TATTCAGTTT GAAAACGGCA TGAACACTGG AGATTTGGTG
ACTATCGGGC CGTTGACCGG CACAGTGGAA CGGATGTCGA TTCGCTCCGT GGGCGTACGC
CAGGATACCG GGGCGTATCA CATCATTCCG TGGTCTTCGA TAACCACCTT TGCTAACTTT
GTCCGCGGCA TTGGTTCGGT GGTGGCAAAT TATGATGTTG ATCGCCATGA AGATGCTGAT
AAAGCCAATC AGGCACTGAA AGATGCGGTA GCGGAATTAA TGGAAAACGA AGAAATTCGC
GGGCTGATTA TTGGTGAACC GAATTTTGCC GGGATTGTCG GCTTAAGCAA TACCGCGTTT
ACACTGCGTG TTTCGTTCAC CACGCTGCCA CTCAAACAGT GGACGGTACG CTTTGCCCTC
GACAGCCAGG TGAAAAAACA TTTCGACCTG GCGGGCGTTC GCGCGCCAGT GCAGACTTAT
CAGGTGCTGC CTGCTCCGGG CGCGACCCCG GCTGAACCGT TACCGCCGGG GGAACCAACG
CTTTAA
 
Protein sequence
MRWILFILFC LLGAPAHAVS IPGVTTTTTT DSTTEPAPEP DIEQKKAAYG ALADVLDNDT 
SRKELIDQLR TVAATPPAEP VPKIVPPTLV EEQTVLQKVT EVSRHYGEAL SARFGQLYRN
ITGSPHKPFN PQTFSNALTH FSMLAVLVFG FYWLIRLCAL PLYRKMGQWA RQKNRERSNW
LQLPAMIIGA FIIDLLLLAL TLFVGQVLSD NLNAGSRTIA FQQSLFLNAF ALIEFFKAVL
RLIFCPNVAE LRPFTIQDES ARYWSRRLSW LSSLIGYGLI VAVPIISNQV NVQIGALANV
IIMLCMTVWA LYLIFRNKKE ITQHLLNFAE HSLAFFSLFI RAFALVWHWL ASAYFIVLFF
FSLFDPGNSL KFMMGATVRS LAIIGIAAFV SGMFSRWLAK TITLSPHTQR NYPELQKRLN
GWLSAALKTA RILTVCVAVM LLLSAWGLFD FWNWLQNGAG QKTVDILIRI ALILFFSAVG
WTVLASLIEN RLASDIHGRP LPSARTRTLL TLFRNALAVI ISTITIMIVL SEIGVNIAPL
LAGAGALGLA ISFGSQTLVK DIITGVFIQF ENGMNTGDLV TIGPLTGTVE RMSIRSVGVR
QDTGAYHIIP WSSITTFANF VRGIGSVVAN YDVDRHEDAD KANQALKDAV AELMENEEIR
GLIIGEPNFA GIVGLSNTAF TLRVSFTTLP LKQWTVRFAL DSQVKKHFDL AGVRAPVQTY
QVLPAPGATP AEPLPPGEPT L