| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcolC_2814 |
|---|
| Symbol | |
|---|
| ID | 6065034 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli ATCC 8739 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010468 |
|---|
| Strand | - |
|---|
| Start bp | 3076082 |
|---|
| End bp | 3077620 |
|---|
| Gene Length | 1539 bp |
|---|
| Protein Length | 512 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 641602220 |
|---|
| Product | extracellular solute-binding protein |
|---|
| Protein accession | YP_001725769 |
|---|
| Protein GI | 170020815 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.993061 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAAGAG CTGTACACCG TAGTGGGTTA GTGGCGCTGG GCATTGCGAC AGCGTTGATG
GCATCTTGTG CATTCGCTGC CAAAGATGTG GTGGTGGCGG TAGGATCGAA CTTCACCACG
CTCGATCCGT ATGACGCAAA TGACACGTTA TCTCAGGCCG TAGCGAAATC GTTTTACCAG
GGGCTGTTTG GTCTGGATAA AGAGATGAAA CTGAAAAACG TGCTGGCGGA GAGTTATACC
GTTTCCGATG ACGGCCTTAC ATACACCGTG AAATTGCGGG AAGGCATTAA ATTCCAGGAT
GGCACCGATT TCAACGCAGC GGCAGTAAAA GCGAATCTGG ACCGGGCCAG CGATCCGGCG
AATCATCTTA AACGCTATAA CCTGTATAAG AATATTGCCA AAACGGAGGC GATCGATCCG
ACAACGGTAA AGATTACTCT CAAACAGCCG TTTTCAGCGT TTATTAATAT TCTTGCCCAT
CCGGCGACCG CGATGATTTC ACCGGCAGCG CTGGAAAAAT ATGGCAAGGA GATTGGTTTT
CATCCGGTGG GAACCGGACC GTATGAACTG GATACCTGGA ATCAGACCGA TTTTGTGAAG
GTGAAAAAAT TCGCGGGTTA CTGGCAGCCA GGATTGCCCA AACTGGACAG CATAACCTGG
CGTCCGGTGG CGGATAACAA CACCCGCGCG GCAATGCTGC AAACCGGTGA AGCGCAGTTT
GCTTTCCCCA TTCCTTACGA GCAGGCCGCA CTGCTGGAGA AAAACAAAAA TATCGAGTTG
ATGGCCAGTC CGTCAATTAT GCAGCGTTAT ATCAGTATGA ACGTGACGCA AAAACCGTTC
GATAACCCGA AGGTCCGTGA GGCGCTGAAT TACGCCATTA ACCGCCCGGC GCTGGTGAAA
GTAGCCTTCG CGGGCTATGC AACGCCAGCT ACTGGTGTGG TACCGCCGAG TATCGCCTAC
GCGCAAAGTT ATAAACCGTG GCCTTACGAT CCAGTGAAAG CGCGCGAATT ACTGAAAGAG
GCGAGATATC CCAACGGTTT CAGTACCACG CTGTGGTCGT CACATAACCA CAGCACCGCG
CAGAAAGTGC TGCAATTTAC CCAGCAGCAG TTAGCGCAGG TCGGGATTAA AGCCCAGGTG
ACTGCGATGG ATGCCGGACA GCGGGCGGCA GAAGTTGAAG GTAAAGGGCA AAAAGAGAGC
GGCGTGCGGA TGTTCTACAC TGGCTGGTCG GCTTCAACCG GCGAAGCTGA CTGGGCACTA
TCGCCGCTGT TTGCATCGCA AAACTGGCCA CCGACGCTGT TTAATACCGC GTTTTACAGC
AATAAACAGG TGGATGACTT CCTGGATCAG GCACTGAAAA CGAATGATCC GGTGGAAAAG
ACCCGCTTAT ATAAGGCGGC GCAGGATATC ATCTGGCAAG AATCGCCGTG GATCCCGCTG
GTGGTAGAAA AACTGGTGTC GGCACACAGT AAAAACCTGA CCGGTTTTTG GATCATGCCA
GACACCGGCT TCAGCTTTGA AGACGCGGAT TTGCAATAA
|
|---|
| Protein sequence | MARAVHRSGL VALGIATALM ASCAFAAKDV VVAVGSNFTT LDPYDANDTL SQAVAKSFYQ
GLFGLDKEMK LKNVLAESYT VSDDGLTYTV KLREGIKFQD GTDFNAAAVK ANLDRASDPA
NHLKRYNLYK NIAKTEAIDP TTVKITLKQP FSAFINILAH PATAMISPAA LEKYGKEIGF
HPVGTGPYEL DTWNQTDFVK VKKFAGYWQP GLPKLDSITW RPVADNNTRA AMLQTGEAQF
AFPIPYEQAA LLEKNKNIEL MASPSIMQRY ISMNVTQKPF DNPKVREALN YAINRPALVK
VAFAGYATPA TGVVPPSIAY AQSYKPWPYD PVKARELLKE ARYPNGFSTT LWSSHNHSTA
QKVLQFTQQQ LAQVGIKAQV TAMDAGQRAA EVEGKGQKES GVRMFYTGWS ASTGEADWAL
SPLFASQNWP PTLFNTAFYS NKQVDDFLDQ ALKTNDPVEK TRLYKAAQDI IWQESPWIPL
VVEKLVSAHS KNLTGFWIMP DTGFSFEDAD LQ
|
|---|
| |