Gene EcolC_2813 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_2813 
Symbol 
ID6065031 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp3075144 
End bp3076064 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content54% 
IMG OID641602219 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_001725768 
Protein GI170020814 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTAATT ACGTTATCAA ACGCTTACTG GGGTTGATTC CAACGCTGTT TATCGTCTCG 
GTGCTGGTGT TTTTATTTGT GCATATGCTG CCCGGCGATC CGGCGCGATT GATTGCCGGG
CCCGAAGCTG ATGCGCAGGT TATAGAACTG GTGCGTCAGC AGCTGGGGTT GGATCAGCCG
CTGTATCACC AGTTCTGGCA CTATATCAGC AATGCTGTGC AGGGGGATTT TGGCCTGTCG
ATGGTGTCGC GTCGTCCGGT TGCCGATGAG ATTGCCAGCC GCTTTATGCC AACGCTGTGG
CTGACCATAA CCAGTATGGT CTGGGCGGTG ATATTTGGTA TGGCGGCGGG AATTATCGCC
GCCGTCTGGC GTAATCGTTG GCCGGATCGA TTGAGTATGA CCATTGCGGT GTCGGGGATC
TCGTTTCCGG CATTTGCTCT GGGGATGCTT TTAATTCAGG TATTCTCCGT TGAACTGGGC
TGGCTGCCTA CCGTGGGAGC AGACAGTTGG CAGCACTACA TTTTACCCTC CCTGACGCTC
GGCGCGGCAG TGGCCGCCGT GATGGCGCGC TTTACCCGCG CGTCGTTTGT CGACGTTTTA
AGCGAAGATT ATATGCGTAC CGCGAGGGCG AAAGGGGTGA GCGAAACCTG GGTTGTCCTC
AAACACGGGC TACGCAACGC GATGATCCCG GTAGTGACCA TGATGGGCTT ACAGTTTGGC
TTTTTGCTCG GTGGTTCTAT CGTGGTGGAG AAAGTTTTCA ACTGGCCCGG ACTTGGACGC
TTACTCGTTG ACTCCGTAGA AATGCGCGAT TACCCGGTGA TTCAGGCGGA AATTCTGCTT
TTCTCGCTGG AATTTATTCT TATCAACTTA GTGGTGGATG TGCTTTACGC CGCCATTAAC
CCGGCTATCA GGTACAAGTA A
 
Protein sequence
MLNYVIKRLL GLIPTLFIVS VLVFLFVHML PGDPARLIAG PEADAQVIEL VRQQLGLDQP 
LYHQFWHYIS NAVQGDFGLS MVSRRPVADE IASRFMPTLW LTITSMVWAV IFGMAAGIIA
AVWRNRWPDR LSMTIAVSGI SFPAFALGML LIQVFSVELG WLPTVGADSW QHYILPSLTL
GAAVAAVMAR FTRASFVDVL SEDYMRTARA KGVSETWVVL KHGLRNAMIP VVTMMGLQFG
FLLGGSIVVE KVFNWPGLGR LLVDSVEMRD YPVIQAEILL FSLEFILINL VVDVLYAAIN
PAIRYK