| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcolC_2811 |
|---|
| Symbol | |
|---|
| ID | 6065025 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli ATCC 8739 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010468 |
|---|
| Strand | - |
|---|
| Start bp | 3071704 |
|---|
| End bp | 3074052 |
|---|
| Gene Length | 2349 bp |
|---|
| Protein Length | 782 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 641602217 |
|---|
| Product | diguanylate phosphodiesterase |
|---|
| Protein accession | YP_001725766 |
|---|
| Protein GI | 170020812 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2200] FOG: EAL domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGAGTT TATACGAAAA GATAAAGATA AGGCTGATAA TTTTATTTTT ATTGGCAGCA
CTGTCATTTA TTGGTCTTTT TTTCATCATT AACTATCAAC TGGTATCGGA ACGCGCGGTA
AAACGTGCCG ATAGCCGCTT TGAACTTATT CAGAAAAACG TTGGCTATTT CTTTAAAGAT
ATTGAACGTT CGGCCCTGAC ATTAAAGGAC TCACTGTATT TATTAAAAAA TACAGAGGAG
ATTCAACGCG CCGTGATTCT GAAAATGGAA ATGATGCCAT TTTTAGACTC GGTGGGACTG
GTACTTGATG ATAATAAATA TTATCTCTTT TCACGGAGGG CGAATGATAA AATCGTTGTT
TATCATCAGG AACAAGTAAA TGGACCGCTT GTCGACGAGT CAGGGCGGGT TATTTTTGCC
GATTTTAACC CATCGAAACG ACCGTGGTCG GTGGCTTCAG ATGACTCTAA CAACAGCTGG
AATCCGGCAT ACAATTGCTT TGATCGTCCG GGTAAAAAAT GTATCTCTTT TACGCTACGT
ATCAACGGCA AAGATCACGA TTTGTTAGCG GTAGATAAAA TTCATGTCGA TTTAAACTGG
CGGTATCTGA ACGAGTATCT TGATCAAATC AGCGCTAATG ATGAAGTTCT ATTTTTGAAA
CAAGGTCATG AGATCATTGC CAAGAATCAA CTCGCTCGTG AAAAACTGAT TATTTATAAT
AGCGAAGGTA ATTATAATAT TATTGATTCT GTCGATACGG AGTATATTGC AAAGACATCA
GCAGTGCCAA ATAATGCATT GTTCGAAATC TATTTTTATT ATCCTGGCGG TAATTTATTG
AACGCCTCAG ATAAACTTTT TTATCTGCCG TTTGCGTTCA TTATTATCGT ATTGCTGGTG
GTTTATTTAA TGACCACTCG TGTGTTCCGT CGGCAATTTT CTGAAATGAC AGAGCTGGTT
AATACGCTGG CATTTTTGCC CGACTCAACG GATCAAATCG AGGCTCTGAA AATTCGCGAA
GGCGATGCGA AAGAGATTAT CAGCATTAAA AATTCGATCG CGGAAATGAA AGATGCCGAA
ATTGAACGGT CAAATAAATT GCTCTCACTG ATCTCTTACG ATCAGGAAAG CGGTTTTATT
AAAAATATGG CGATTATTGA GTCCAACAAT AATCAGTATC TGGCTGTGGG GATCATCAAA
CTGTGTGGTC TGGAAGCCGT GGAAGCGGTG TTTGGTGTTG ATGAACGCAA TAAAATCGTC
AGGAAATTGT GTCAGCGAAT TGCCGAAAAA TATGCGCAAT GCTGCGATAT CGTGACATTC
AATGCCGATC TCTATTTACT TCTGTGCCGG GAAAATGTAC AGACATTTAC CCGTAAAATA
GCGATGGTAA ACGATTTTGA CAGCAGCTTT GGCTACCGTA ATCTGCACAT CCATAAGTCT
GCCATTTGTG AACCTTTGCA GGGGGAAAAC GCCTGGAGTT ACGCAGAAAA ACTGAAACTG
GCGATTTCCA GTATCCGTGA CCATATGTTC TCAGAGTTTA TTTTCTGTGA TGACGCGAAA
CTCAACGAAA TAGAAGAGAA TATCTGGATT GCGCGTAATA TTCGCCATGC AATGGAAATT
GGCGAACTAT TCCTGGTCTA TCAACCGATC GTTGATATTA ACACCCGCGC CATTCTGGGC
GCGGAGGCGT TGTGCCGTTG GGTGTCTGCG GAGCGGGGGA TCATTTCACC GCTGAAGTTC
ATTACCATTG CTGAAGATAT CGGGTTTATC AATGAGCTGG GTTATCAGAT TATTAAAACG
GCAATGGGTG AATTCAGACA TTTTAGTCAG CGTGCGTCGC TGAAGAATGA TTTCTTACTG
CATATTAATA TTTCGCCATG GCAGTTAAAC GAACCGCACT TTCATGAGCG TTTTACCACC
ATCATGAAAG AAAATGGCCT GAAGGCGAAC AGCCTCTGTG TTGAGATCAC TGAAACCGTG
ATCGAGCGAA TTAATGAACA TTTTTATCTC AATATTGAAC AACTGCGTAA ACAAGGGGTA
CGGATATCGA TTGATGACTT TGGCACCGGT TTGTCAAACC TGAAACGTTT TTATGAAATT
AATCCAGATA GCATAAAGGT GGACTCGCAA TTTACCGGCG ATATTTTCGG TACTGCGGGA
AAAATTGTGC GCATTATTTT CGACCTGGCA CGCTATAACC GGATCCCGGT GATTGCGGAA
GGCGTAGAGA GCGAAGACGT TGCGCGCGAA TTAATCAAAT TAGGATGTGT TCAGGCTCAG
GGGTATCTGT ACCAGAAACC CATGCCATTC TCCGCCTGGG ATAAAAGTGG AAAATTAGTA
AAAGAGTAG
|
|---|
| Protein sequence | MLSLYEKIKI RLIILFLLAA LSFIGLFFII NYQLVSERAV KRADSRFELI QKNVGYFFKD
IERSALTLKD SLYLLKNTEE IQRAVILKME MMPFLDSVGL VLDDNKYYLF SRRANDKIVV
YHQEQVNGPL VDESGRVIFA DFNPSKRPWS VASDDSNNSW NPAYNCFDRP GKKCISFTLR
INGKDHDLLA VDKIHVDLNW RYLNEYLDQI SANDEVLFLK QGHEIIAKNQ LAREKLIIYN
SEGNYNIIDS VDTEYIAKTS AVPNNALFEI YFYYPGGNLL NASDKLFYLP FAFIIIVLLV
VYLMTTRVFR RQFSEMTELV NTLAFLPDST DQIEALKIRE GDAKEIISIK NSIAEMKDAE
IERSNKLLSL ISYDQESGFI KNMAIIESNN NQYLAVGIIK LCGLEAVEAV FGVDERNKIV
RKLCQRIAEK YAQCCDIVTF NADLYLLLCR ENVQTFTRKI AMVNDFDSSF GYRNLHIHKS
AICEPLQGEN AWSYAEKLKL AISSIRDHMF SEFIFCDDAK LNEIEENIWI ARNIRHAMEI
GELFLVYQPI VDINTRAILG AEALCRWVSA ERGIISPLKF ITIAEDIGFI NELGYQIIKT
AMGEFRHFSQ RASLKNDFLL HINISPWQLN EPHFHERFTT IMKENGLKAN SLCVEITETV
IERINEHFYL NIEQLRKQGV RISIDDFGTG LSNLKRFYEI NPDSIKVDSQ FTGDIFGTAG
KIVRIIFDLA RYNRIPVIAE GVESEDVARE LIKLGCVQAQ GYLYQKPMPF SAWDKSGKLV
KE
|
|---|
| |