| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcolC_2795 |
|---|
| Symbol | |
|---|
| ID | 6064946 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli ATCC 8739 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010468 |
|---|
| Strand | + |
|---|
| Start bp | 3056961 |
|---|
| End bp | 3058013 |
|---|
| Gene Length | 1053 bp |
|---|
| Protein Length | 350 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 641602201 |
|---|
| Product | integrase family protein |
|---|
| Protein accession | YP_001725750 |
|---|
| Protein GI | 170020796 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG4974] Site-specific recombinase XerD |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0861235 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.105042 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGTAC GAAAACTCAC CACAGGAAAA TGGCTTTGCG AATGTTACCC CGCCGGACGT
AGTGGACGCC GTGTGCGTAA ACAATTCGCC ACCAAAGGCG AAGCTCTGGC TTTTGAGCGT
CACACGATGG AAGAAACCGA AGCAAAGCCC TGGCTGGGCG AATCAGTGGA TCGTCGGACA
TTGAAAGACG TGGTTGAGCT ATGGTTCAAA CTACATGGTA AATCTCTAAC CGCTGGGCAG
CATGTCTATG ACAAATTGCT GTTGATGGTT GATGCTCTGG GCAATCCTCT TGCAACCGAT
CTCACCTCTA AAATGTTTGC CCACTATCGA GATAAACGCC TGACAGGCGA GATCTACTTC
AGCGAGAAAT GGAAGAAAGG AGCAAGCCCG GTCACCATTA ACCTGGAGCA AAGCTATCTA
AGTAGTGTTT TTAGCGAACT ATCCCGTCTG GGCGAATGGT CGTATCCGAA CCCACTGGAG
AACATGCGAA AATTCACCAT CGCAGAAAAA GAGATGGCAT GGCTTACCCA TGAGCAGATT
GTTGAATTGC TGGCTGATTG CAAACGTCAG GACCCAATTC TGGCACTGGT AGTTAAGATA
TGCTTAAGCA CAGGCGCACG CTGGCGTGAA GCCGTAAATC TTACCCGCTC ACAGGTGACC
AAATACCGAA TTACCTTTGT CAGAACGAAG GGGAAGAAAA ACAGAAGCAT CCCTATCAGT
AAAGAGCTTT ACGAAGAGAT CATGGCGCTT GATGGGTTCA ATTTCTTCAC AGACTGCTAT
TTTCAATTTT TATCCGTGAT GGAAAAAACG TCTATCGTGC TCCCTCGCGG TCAACTGACA
CACGTTCTGC GCCATACGTT TGCGGCGCAC TTCATGATGT CGGGTGGAAA CATTCTGGCC
TTACAAAAAA TTCTTGGACA CCACGATATA AAAATGACTA TGCGTTACGC ACATCTGGCA
CCGGATCATC TGGAAACGGC GCTCCGTTTC AATCCTCTGG CAACGCTGCC AAATGGCGAC
AAAGTGGCGG CAGCGGTTGG CATTACCCCG TAA
|
|---|
| Protein sequence | MAVRKLTTGK WLCECYPAGR SGRRVRKQFA TKGEALAFER HTMEETEAKP WLGESVDRRT
LKDVVELWFK LHGKSLTAGQ HVYDKLLLMV DALGNPLATD LTSKMFAHYR DKRLTGEIYF
SEKWKKGASP VTINLEQSYL SSVFSELSRL GEWSYPNPLE NMRKFTIAEK EMAWLTHEQI
VELLADCKRQ DPILALVVKI CLSTGARWRE AVNLTRSQVT KYRITFVRTK GKKNRSIPIS
KELYEEIMAL DGFNFFTDCY FQFLSVMEKT SIVLPRGQLT HVLRHTFAAH FMMSGGNILA
LQKILGHHDI KMTMRYAHLA PDHLETALRF NPLATLPNGD KVAAAVGITP
|
|---|
| |