| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcolC_2776 |
|---|
| Symbol | |
|---|
| ID | 6064858 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli ATCC 8739 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010468 |
|---|
| Strand | - |
|---|
| Start bp | 3042873 |
|---|
| End bp | 3043706 |
|---|
| Gene Length | 834 bp |
|---|
| Protein Length | 277 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 641602182 |
|---|
| Product | capsid scaffolding |
|---|
| Protein accession | YP_001725731 |
|---|
| Protein GI | 170020777 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.569535 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 3 |
|---|
| Fosmid unclonability p-value | 0.0000191582 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | ATGACAGTGA AAGCAAAGCG TTTTCGCATC GGGGTGGAAG GTGCCACCAC CGACGGACGC
GAAATCCAGC GTGAATGGCT GGAACAGATG GCAGCCAGCT ACAACCCGGC GGTGTACACC
GCGCTGATTA ACCTTGAGCA CATCAAGTCT TATCTGCCGG ACAGCACCTT TAACCGCTAC
GGCAAGGTGA CGGCGCTGTT TGCTGAAGAA ATCACGGAAG GTCCGCTGGC GGGCAAGATG
GCACTGTATG CCGACGTTGA GCCAACGGAG TCCCTGGTGG AACTGGTGAA AAAAGGCCAG
AAATTATTCA CCTCTATGGA AGTCAGCACG AAGTTTGCTG ATACGGGCAA AGCCTACCTG
GTCGGCCTGG CTGCTACAGA TGACCCTGCC AGTCTGGGCA CTGAAATGCT GACATTCAGC
GCCAGTGCAG CCCATAACCC GCTGGCAAAC CGCAAGCAGA ATCCTGCCAA TCTCTTTACC
GCTGCAGAGG AAACGGTGAT CGAACTGGAA GAAATCCAGG AGGACAAACC GTCCCTGTTT
GCCCGTGTCA CGGCGCTGTT TACCAAAAAA GAGCAGTCCG ATGACGCCCG GTTCTCTGAT
GTGCATAAGG CCGTGGAGCT GGTCGCTACT GAGCAGCAAA ACCTGAGCGC ACGCACCGAA
AAATCCCTTT CTGAGCAGGA AGAACGTCTG TCTGAGCTGG AGACTGCCCT GCAGGCACAG
CAGACCGCCT TTAACGAACT GGTGAATAAG CTGAGTCATG AAGACAGCCG CCAGGACTAC
CGCCAGCGTG CAACAGGCGG TAACGCCCCC GCTGACACTC TGACCAATTG CTGA
|
|---|
| Protein sequence | MTVKAKRFRI GVEGATTDGR EIQREWLEQM AASYNPAVYT ALINLEHIKS YLPDSTFNRY
GKVTALFAEE ITEGPLAGKM ALYADVEPTE SLVELVKKGQ KLFTSMEVST KFADTGKAYL
VGLAATDDPA SLGTEMLTFS ASAAHNPLAN RKQNPANLFT AAEETVIELE EIQEDKPSLF
ARVTALFTKK EQSDDARFSD VHKAVELVAT EQQNLSARTE KSLSEQEERL SELETALQAQ
QTAFNELVNK LSHEDSRQDY RQRATGGNAP ADTLTNC
|
|---|
| |